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Human element [ hs2756 ]


Position: chr3:86,963,508-86,965,210 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: RNU6-69P - VGLL3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CATCGACCACACTCACCATCcccccgtccccacaaatgacccactgtggaacttgtgttt
ctcactgctgcacgtttagactctgtagattctaggtcttaaaccccaataggggaaatt
ttgcttctaggaaatgcagtaagggtttcttcaaacctgaacctttagcttttgcttagt
cattttggactcctcatgcctgtagaccagcacataaatgatttttaaaaacagttacta
gattgacaggatgtttaaccctagttatcatgcatttctatgtttgctgccatataatgg
aggtgtggaggagtgcactgggcactgagggaaatcactgtagcctctcgtggtgtttct
atgctcagtgaaaaaagaaaacaggcatttgcagcagcaacaatctgataaggggcaaga
caaagaagactcagacaactaagggttgaagctctgtgcttctctatcaggcaagcagct
gtatgccagctgtaaggctggccatgtgaaagaaagctgtacagtgggtggtagagaagg
aagataatgaatatcagttacagccttgggactcagactgtagcaggaactgtagctcgc
tctactaaacctattttaaattcatatttaaagaggttgtgacaaggcacgacttcagag
ttgttaaaaagttgaacttaatatggagcagtagcatttctgagcagtgaaaagggatac
tatagcagacaacttgtgtgttttgtgtcagagtccctaagccaacttgcaattttagct
gcatttatggaaagttcccaggcactccagcagcatcccacttttcttctttgcttttct
tctttacattttgtgtggaccctcactccgcacacagggcagcttgggagtgggagatga
ttaactgccctggggcacagccctcaacagtaatggacaagggtcatggtaaaggcccag
tttcctgttctacagagaaactattctcagggtctccaacaggactgagccccagtggct
cacagtcataacccaccctttaatggcatctcttcctttcaaccccacattcctggatcc
tccgatattgctttctgggatcacatactaagtaagttacctaaaaaaaaaacagtcact
ctttctgagaaaatctaaattgtgaacagatataaagtgccctacaccgtgcttgataaa
taatcagtacccagtacatgttcctatcctccgatttttttctttgccataagatattta
tagttctttggagaaaataaccaactaaaagataggtgttatttgtaaatatcatcatac
tctgcaaatgtacctatagccagaaattaagccagcatattcccatgtacagagggccaa
ctgatgtttttcattcatatatgtctggagcttgagcggcagagtgttgtatcactacaa
taggaacctgaagaattggattttgactctgtttcatttacttactgggattttatttta
tgtttaaaatattcaccaatatatttaacgttaggttcattgtcttcaaaatattataat
ttcttataatttctcagttgagatgaagtccgagtaagctaatggatacaaatatgtctt
gtaaaatgtaagctatcttaatgtaaatgtacatgtctctaccacatgatgtcaaagatg
gttGTTATTTGGCGAAGTGAGCC
Primer
(+)CATCGACCACACTCACCATC
(+)GGCTCACTTCGCCAAATAAC


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