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Human element [ hs2751 ]


Position: chr6:136,259,095-136,262,548 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PDE7B(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGGCCCCATTATGGTTTTAgggtatataagatggtttctcatatattacatttctgtag
aggagtgagcattgttactccctgtactctacaatgagttttgaaaggaaaagtcaactc
tgactaagatcacacagctgttgaggaataggtttgggatttgaaccccgatatactcag
ttctttccattatgtccaccaatctgttttcttttcttttttgttctatattgcctcctg
ttttctccaacacaaagtgtctatggacttcaccttttaaaaatgactgtatataagtga
aatgtgtttggctttagttgtttgccttcacagctatctttttgaaaacaaagtgtggct
aggtgtaaacccttgggattctgagacaataagtaaaagatgaaatagcattgcaaactt
ctgacatttttgaactgtgtatcaagatttgtggcatatgtatttgagtctgctacagga
aaattcccagagcacataccacaattattcccaaagtaccttgaactgagatgcctagtc
agttcctataactgggtgcaccagagatcgcactgtactccatgccataagccttcacag
gtacaggtttttctaaaatggagcttgtgcagaggctatagtcgttttgcacaatgaaag
aggctgtcttcaatgtgcatttcgatgtgtgctatgggaatcaggactaaccacgaccca
tggagacaatgctgcatgacttggagagtgcaacgtaagacgcaatgactctgagcctgc
accacgccatctgacctcaggatctccctgcagggatacgaggagatcttagccatatag
cctttctattgccctctactgtctagggataaaatgacagaaaacacagttctgcatttt
ggaagtttgcttaataactaaaaaaataaaaataaaaattactcttgggctgaaagcagg
ttttccaagttttggttcataataagtagtttttaaacatttaaaaataggggtatgtaa
taaaatgctgagagactctctggagaccgctgctgctggcactgctctaatagaaagcat
acgccattgagctaacattctgttctttgactgaagaagaaaacaaagctgttaaaagct
ggtaagctcattttccaatagcaatagcattaatatctttcaagtcactcctaaccatac
ctaattagaggtttataagggatggctcttctggaagggtcacctcaggttacgtagccc
acagatttgctgttgattgttggcaacaatggatttgtgtagattttctgctcagctcga
ggtgattatcttttttcttttttttcttttgctggtgtgtctcttattttgactggctga
ggttgggctggacgatgaggccctgatttgaaagcagtgccaggttgttgctggagatct
gcactgacagattgttgaaaacttattagtctctgacgttttaacagcctgcaatgggat
agaaatctgctctttcactggaaaagcttaaaaaggaaaacatgagctcgagctgaaatc
agccccagttccaaatctgccgtcctctggcaccggagtgctgagggctgccacagtgtg
tagagattgaggcctgactatgccacccacatggtagacaggactctgcataaaatgatg
tggccctgggccactgtcacgtaggagaccctgaaaatgtatcttctgggagctggggtg
ttctcaacactgggtgctaatggcttcagcagtaggagaaatcagcctcactgaggtttc
agctgggtggctggggggattcttttggtcatagccattctataagataattcaagaaaa
aggactaagaaacacttcagcttggtatcctctttggggtaacttctacctcaaatgggc
aaaatgatggcagccggtatcactggtgagagacatctggagccaattaagagctctaat
acagagatagctatattgtaattatttgatacaatgctagagtaattcattaagcatcct
ggttcttcgaaagcaaaccaagcctctccagtccagtccataaagatttttttttaaatc
actattgaccccaatttttctccaatcccctctgtgacgaccactttgattaagctctct
gctttcacccccagcagttttgctcccatccttggcagctgctttcaagatcttaaccaa
ggttctggactttgcccagacagctacctatgcctagaggagtcctctcttttaccagat
aactctttcctatgctccagactcaggcctgcggtcatgtctttcaaagccttctccagt
aaccccagtcaggggtgggtacccagcattgaaagtgcccatagccttctatgttctgac
ttcagagtaggctacaaacttcttaaggaaaagacctggcctgaatctcatttcattttg
tatccacactcatgatacactgttagcacagagtaggcactcagtaatgtcttgctgact
gttcacttattcattcactcacttgatagacattaatggagatccaaacttccaggcact
gtcagggagttcagtttcttaacaggagatatctttttatgctctacagacctaaactac
tttctctccaggcctatcttctagggatctgtctttgattagtaccattcagttcttggt
tggggaaaagtgtgagatgagaagtgacccagatgtttggaaatgtcatctcaatgtcag
gtttcgcccttcatcagcccattgcagctgcacatcatgcagctgcatctatggcagtgc
ttactggtgtatatgcagaaatgtcctggaaaaataatctcttctcatgctaccccagaa
aacttcagaatagcccacagaattacggtaaggaattattcattcattcatttaattaac
attgggagcgcccattatgcattagtcattgtcctagacatttagggattcagtggtaag
caaataaaatagatgcaatcccaatagatatatcagcatacaggcatttgccttgtttac
ctaaaacctcatttgggaaattcatgtattatatggcaaacttgcagattcgaagtaaat
agaaaggaagtgagggtgggggtgaaagcagcctgtgcttaagctatgcctactccagat
tccctttgccactcttgggacggacaagatgtactttactttccactaaacttcaaaaac
ttccccatagactgatcatggttagcactttttcagctcaagaaacttaggtttgatttt
ttttttccccaaaaaatgactctagtcatatgtcaggggttctttttgttctggttgatt
ttgttttaacatgctatctagcacagtcatggagtgggtgagtttttctgcatttctgca
atagcattcagtgtTTAGTTCCCAGCTTCATGGG
Primer
(+)CAGGCCCCATTATGGTTTTA
(+)CCCATGAAGCTGGGAACTAA


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