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Mouse element [ mm275 ]


Position: chr1:92,142,824-92,144,268 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Cxcr7 - Cops8

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGTACACACTGGTGGATGGTGctgggcccagagagctttacattccttggcctggttgga
cacacgtcagtctcccattaagagctttggttgtggcgttcttagaaagttatttgtttt
tcggagttggcgagttagcacacaatgaactgtctcctaagaagaggagacggaccccag
gctgcaggctgcttcaatcaatcattcattcattcacttatccatcaccagggggtgtcc
gctgtgagccagacactgtggatttaaagatgaaaagagtttggcccctgtcagctccca
aggaaggctcaggctgaccactgagtgggtgacaggcgtacaaacagcctcccgtggccc
ttgggagacgtgggctgaataagacagggggacaggacaatcatagactaggagagtcca
gggtgcctggccaaggaggagaattctgtgctggttgaatgaagtgttgggcctggggga
ggggttggcgagctgaatacacctctggcctgagaagctatccagatatcatgcagggca
gagaaaggaggcaggaacaatgggggaagaggatgaagagtcattgcatcttttttctct
tgaaagaaacagggtggtggtaaaaacatgtaagttaaataacagcttggtcatctggtg
acagggacaggtgcctttgggagatgagaaactgcagacaaggagatagggggaggatgg
ttcaatggttggccaagataacacgaggcagagtttgccatggctcagtagaagggacag
agagagccttatcctgagacctgcttgagagccagggaaggcagaaagccattaatgccc
aggcagtggggctacctcttgacttctttcagaaaagtgacagccactgtcccaggagca
ctggtggaggaatggagtcagagggaaacttgagggtgcaaatctcacttgcagaggatg
ggcattctgggggggggggcatggctgggggtggggtgggggacgcatggaaaatctgtg
agggaaacccagacctcaagcctatgttcatcctccagactacacaaccccatggggcct
ctgtatagtccctggttggagcacagatgagactaagagaggcagtaggtggcaggccac
acctggaagggcgagctgccaacaatagacagagagagcttgaaggaggatcagcagatc
tgcaagctatgtcagctgcccagtgagtacagcggttgatgcctggtttaaacctgatgc
tttcttagccaccgagatggtgagagtcagcactgacacttgctgggtgggagccaaggg
gtgtctggaggaggaagcaagttgcaccttaggagtgaaagaaacaacatccatcactta
ggatgccctggaggtaggctctgtggccagctagctctgagttctTCCATCTACACAGCA
GGCAG
Primer
(+)TGTACACACTGGTGGATGGTG
(+)CTGCCTGCTGTGTAGATGGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.