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Human element [ hs2747 ]


Position: chr4:127,835,640-127,840,086 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR2054 - INTU

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTGGTTCCAAGGGTAAGCAGgaagtggggaacaaataacagagcacagaggatttttagg
gcagtgaaactattctgtatgactctttttataagtctctttgttaaaatcaatacgata
tgcaacaaacaccaagagggaactctaaagtaaatttttggattttgagtaataacaatg
tatcaaggtagagccattgattgtaacaaatgtcccaccttggtgctggatatccataat
tggagaagttgtgcccgtgtggggacaggaaaacatgggaactctttgtaccttccactc
aattttgctgtaaacctaaaattatcctaaaacataaagtttattttttttaaaaaaaga
gaatattgccaatactttgcaaattagctgtccttgccagtgtgtatatcattccttaat
aggaagttaggcagtgaggataatggactatttgttaggaagaaattgaacaattattgg
tgaaactaagcattttccaaagtactcttcaaaagaaagtttcttttaggaaataatttt
gagaaatgctgtctattatattctctcttggaaagcaacacggcatatctgctaatatgc
cctggagtaaagaaatctacttaaccttgtttaatgcaggacttatttattcagcaaaac
cttatctaacatgtcctttgtgggaggcactcttctaggcatttgctcaagttttaactc
ttttaatcttcatgagaatcctttgagggagccattattattattatcatcttacaaatt
ttaaaactaaaatctacattgtaaataaattaaataaattgcccaaagtcagtaactggt
aaattgtggagctgggattcaaatacatgtatgtgatcatgaaaccacctcttcataaaa
caatgacaataaaattgaattggtgttctgacacaccttgggaatcattagtacaccaca
ttacagttttaaaatgttttctatgccttttcttttcatttgtaagtacaatcactctag
agctagatggcacagggacattttataaataattatttttcttggttttcagagctaata
agttgaagcttcagttttgatatactgaactccaacgtgtattctctgcaatacattctg
ctgaaaaagcaaggtgttctaatgtacaaataaagatgggaaaagggcaggtagtgagag
gatactgggctgtaagacagaaaagggatttggaggacaaatgtaaaattataaggggcc
tttaattcctggctaaagaacttggaagtgattgaaaatgctgattcggtgagagatgtt
gagctgatcagggaaacattcaaatcagttatgtaaaggcaagttcatacaatacaaaca
atacatgtgatggaaaaataatggaagctgggagacccacaaattattaaattagtggta
tgatctaaattaaaggttgtttgatcggataaccagaattttatgctcctaaataataca
gaagaaggtttatattacagtaatgtaacattagagttaaaacaaatttacataaaattg
agtaatcttctatttactcctttttataagtctctatttcatctgcaggcagagtgaagt
tctttcctggcttctctttaggaggagagtactgattgctcttttgaactggaaaaatta
ttgcattgctactctgttgcacaaaatgagggaagcatgtgctgtgaatctgcaagaaac
cccttgccaactgctccgtgtcctttatctgcattttacaataaggcctcctttttctta
aaggcacctgggctgttttcaacttaacattctaaagacaacaaatatagaagaacagtt
cttaaggtaattatatagtgctgtttccgtgtgattaggtcaacctgacaaatactcaaa
actgaaacagaactctaaactatgctgctcacaaggacgtaagcacagcctcaatagatt
tttcaagattgggacaaaaacatgatgtaagactccctcctttaaaaaaaaaaaatcacc
aaacctgaggaatggaaaatcaattgtgaccatgaaatatatatgcatatagtttttaat
gtgatttccaagattggatcactaactcaaaacttctacatatgttcccatcttcagtct
tagacaaaatgacctcatgagctgacacacttgctctgagacttgcagaccgctaggact
gttttcaggcaggctattgaggaaacagggtcaggccctacaagcatcctgatctgggct
tcgttgtagattgcacgttccgaacccgtttctgcctgcactgtcattacattatgctgc
aggctgcatgcggtttctattctcgtttccattctgttgctttcaatgtttttggaatca
gttgaagctgaaacatcttggaagaaaagtttggttttttttgaaccccctggtttcaat
tatttctaaatctgacgcacaaacactgcttttaaagatatgcgactgaagtgccaaata
aggatcttttgattttttgaaatacatgtggttgaaatttgagacctggctgctgccaag
ctgcagttcagggaatagaatactggcacaagaaaatgagccgttgttcagaggataatg
ttagaaggaactgtcctacagaaggaaaatgtaaattttcatgatttagcttatgcttgt
gggacaattccataatcctttgttaaacacgtaaaagttgaaatgctgactctcctgttg
tttattcaggttctcagctataaatttctcacatacataagcctgatttagactaaatcc
ttataatattaattttttaaaaatgcattcgcaagatatcatgccacactcagactaatc
caaacaattccacatttttcagtgaaacctgaagataataatatgtactgatttctctaa
aagtatagtagtttaatagactcttctggtgcaactggaattgcagtaagatcttttagg
ctaaagcattattcagaaggaaagcatcaaagtataatttacctgtttgtgacaagtgct
agaagttcctccaataaattacagtagagaaatcatagtaaagtcaccgtacttcaatat
ctagcattttagccaatggtacacataaaaagtaagatcaatagtactatcattttgact
tgatttgccaagggtagacgccacatttggcaaaatataccaagaactattatatcaact
aagacaatataaaggttgaaacgatattatgttgccaaagaggaccatgaagaaatagca
aaatcataaaggaaaatcaacatgcagtacaagcaaatatgggcaattttaaggatcaca
acaggaaaagaaaaggcactatttaagtatttccagagtgtattaccctaaccttagaat
tgggtatctcagacaggtaagaggaagaaagtgagactcaaagtatttttcataagattc
tgtatgatttgaattatttgtgcaataagtgaacatatattaatttaatacaactggttt
gtaaagtttactttttaaaaattcaacataaattcccagaatcactatacttttctaaaa
gtatctactgtgcactgtgtacctttcagtaacaaaatatatacaaagataacaagtccc
tttagaaatttatactaaaactgccattatgttacatcaaatctacagattaaatgtgaa
agtatgtcagctaagcctatggttggttttatacaggctgaacatccagataaattaatg
caacttttactattttttgtttaatagtgtaaggcacaaccataaaaaaagttatctaca
agtttgaaagacaaaatagatatgactcattcataatatggtaatcacagggcaataatt
ggagaaaatatttgaaggtaatagaaacattttgtgagtattatatatttataagagaat
ctagaatagaaagtgttatttgtttctattttgtcttaaaggtattccagaaaaatactt
aagatatcagaagtgtttattttgaaactagagaaaggtttgttgagcttaaaagaatgg
cggattcaaattgcaggcttgaaaagaaacatggaggcaatcaaagattagtggttaaaa
aaatattctgaagattgatacataataccacaagaacatgaacaaattaaaattttttga
ataaaaagatagtagagtcaatatgggaattttaaaaattctttcaaattatatgcaaaa
ctttaggttaaagaaatttaaagaccaaattaatgaattaatgaatcgaaagacagaact
aagggaaactctcagaaactaagagggaaagagagaatttgagattaagagatgtgcaga
aaaatttgaggacctcgaatacctgcctaattccataaagaaaacatATAGGAATGCCCC
AAAGAGG
Primer
(+)GTGGTTCCAAGGGTAAGCAG
(+)CCTCTTTGGGGCATTCCTAT


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