Human element [ hs2746 ]Position: chr2:18,699,976-18,703,483 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: KCNS3 - NT5C1B-RDH14 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence AATGGCATTTCAGGAAGCAGgttttgtgcatatcgcctgtggaagccgggccacttgaac cccgcctgtgaaatgcctctcggatgagcactttttaaaactctttagtgtattcttttt cagtgaatgggtaatgcgttaggacattggagaatacaggccttaagaaacatgagcttg gcttcttcccaagtattgatgtctccaaaccaaagaattagcctaaataaatttgttttg agtgactgtgtgacctcgaacagcctactttcccttggtcagctagatgtgtttcctaca aactgaagagcttagatgagctgctctttcaagtcccttccaggacacagaggcccttcc caagaactcaacacaggaaagctggcctctgcccccagaagcttccaggcgaaggagaac agtcaaggagccaaagtcctaggtgctccgctggagggtgacttccactcacaccaatct tccaaaacctagggacttgggaccgagcagcggcattatatcatttccaggcaaagccca agttctgtcttccgtacccacggtctcttttcgcattttgcgcaacatcatttgctgctt catctgacctaactcggtgggtttcttgattttaatgtgtgtagaaattacttattggag aattttattaaacatgcacattcttaagcctggcgtccagtgatcctcttttgggaggcc tgggcaagggccacgacgtaggcacgcttcacaggcacccaaaaggttcccacgcagcag tgacccatgaaacatgctttgaggaacactcatctgatggttctggagtggggttggtct ccctcacagactcaggctcctgggagccagggactcatttgacattgcagtgaaacagag aacatggaaagggacatgccatgtagtcaatccaaattggatgagtaagtgaatcaatga atgactaaggcacatgcaatagggaaggtcattgtcaccatgaactgaaactttccggca gtgttggagaaggtaaggtgagtgggagacgtggtacaagacaggcttcaaagctgggtc tctgatgggtcaccagaaacagtagggtccttgtaaggcaatgcttcttctctagcagac acatttttccagagggagtctgtcagcctccatgatattttaagctgcatccctcaaaat gtcgtaaaggaggattaaagtataaatgattgtcagttcactcctgtcctcctggtactg cgctgagcatctcaggctgtttggaagacaggggcagcaagggaggggaggagcagggga gggccttaaaatgtgactgaacagagcctgcagagaatgaggagctctggtgtgtcttgg ggggctaaagcagttcacaggctgctactttttttgtgacatagcttttacggggggaga gccagaatattaagctcattgcttccagatgggaaggttggacaagacagagaggctttg gctccgaaagcttggacgctgtggtgcgatatggatgtgacatattgaagtaatcgagat agaagatctggctttagccaaggctgtcagatagatactttttaaaacattacatggttt gtaacaaggtattgtgtatcctcacagaaactctgccgcctaggtctctgggaaggcagt ggggggaaaagtgtgcttattttgcttgagttactaaagctccttttatatatgaggaat ttggcatctcctggctgggaacggctgagccaacagtgtccgatgcacttgtaatgtaga tcatgctagtgacttgctaagtgagtccaggtgtttgcataagaggcagggtcctaagca cctccttatttgagccccgaagcaatcatggcccagtgcttcaaatgagcctcaaatctg tttaataaatcatccttctatttatagagttaatccagggagaaagcctccgtgttgtct ggtggggcatgtgccaccagagggcgcccgatgtctgcctcattccatcagagtggctct tgctatatcaggggttttgcctcccctgcaagctcctttatccagtcctttccttcctga gctttcaggccctggatggcatacctatggatcaaagccaggtggggcagggagaacccc cagaccctttcacgagggaccctttctcctccagtgtcttcagtgagaacttccctctgg gccagcctgcccatgcacgctgtggaaagggagagaaggccctgcctcatttggaaatcc tgagtttgcaatgtgctggtttacttgcaattctcatgttcagagaatgggccccttcct tggctaacttcacacctgagaacatgtcggggcatccctgcggacccagtgtctgcttca catttcaaaggctgggaactgttaagcttgtattttgattaaaattttgtattagcgccc ccccccttcaatgtaatttcaggatatttaatttcaaccaatcatctgaaggaaagtggg gggaggaggtatctgatgtgaaacagcacacggggaaagccagccaagttagaaaataga gcagctcggggctgtgtcgatgtgacaactgaagtctcttttgttctctcaggcagggtc tgaaaccaaagcccctcaaggacaggagatctacctctgggcttggaatcaagaggacca gtcgttccgggaggcctccctgctacctttggggcctttggcaagtccctgaaagtttcc aggtttcagccacctatttgggctctggggagaggaatgcctaccatttgcctctggctc tgggattttaaaaggaaaagcagcagagtctttggaaaaaccaatctctgaagacccagg gtgaacattagttacaacaccctagcttcgaggtgatgtaaacttcaggtacggaggtta cgctcagaggaataaaggagcattcgtcaaacatgagctcccctcgattgtggtctaggg tggagaccagttattcaagtgtctgtgggcccaggcaggtaatgaaaatgtagttatggg ggaacgcccggctcagaacaggcgtagagtaaatagttgttgttgactgactgaaggaat aaaagtgggtctgatataagacaatagggaatggtacaaaccttgtcaaactggaaggta catgacttgaatttgatgttcaaactattgctttttaaaacactagtttaaacatcttct ggccctagagctaccaatttgtatctctgtatccacttttatatattttaggcccattta aaagaccaggaaaggaggaaaataaatctagcagtataggacgttcttaatcttgtcagt taaccctaattttaacaccccatctctgtttgtcattctacttaaccactttggattaag caaattcagtcactttggaaatagtacgtgtggatggtaccttacaggatgaaggaccat aacaatatTCTCTAGCGCAGGCCTCTACPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.