Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2736 ]


Position: chr1:119,767,322-119,771,707 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: WARS2 - HAO2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCTCCTTTGCCTCTTCCTCTtccacttaattttttctctcccattttcaaatgaaagaca
tggctctgatactagtacattttaaacaagccactttacctctttggaaaatagttctgc
atctgtaaaataaaataattcttagatttccctctactgctaaaattctatgattctttg
aaatacctcatttgttcaaataatccaaagttcttctccaaaaattttctctaaaaacct
gtgcaaatcgactatgtcatgattgacaagcagagtaatagcttaatccccttttcttta
tctttggggatttctttaccttggatattagaaagtcaaacacaatttttgacacttcct
ttttccacactcacaatttcagaagcctgagaatatagaggtatgcttctgcagcagcaa
ttcagatattttatcagcattggaagctaaggatctgggaaagaggaggaaaaagccaga
aatcacaatttttaaaaagaatttttttgtggtattgaactcccaaagattattatatgt
agctcagattgcatgccctactttctattttcatgttctatgtattttcatgttctttcc
cagatagaatatctaagagagcatcccttccccctacaaagaatgatttttattttccat
atggtatatgctagcaatcctggcagttcaccacatttatgtaaacatgcagagatacct
ataaattactggacttatcccagtttaagtttccaactatgtactgtaatatttacagct
gttattactttagcctcagaagttatttgggcccatttatatggctgattagtcatttag
actgtaggctccatttattacattgtttggggatggggaactcacagatactcactagag
gaaccaagaatctatatataagccaagagttctgcaacctggtggaacttttcaaacctg
aggactccaactccaaataccagctgaccgtcagtcacctagggctaccctgcactttaa
gatgactttgggagaacctgggcacttccccagagtatttacattggtagtgaaaggcca
agagaactaacagcctctcttttaggaatctggaccttatccaaaagatctgagactggt
ggtggggtggggaggagaccctagtggaccttaataatattgctgcaggaatcttggcag
taaagactaaactgggctttctcaatttccccccacccatctccactgcaagtctcattg
cttagcccaggctgagcgcagttcccttgaaggtccaaaaggctggaaatccgggtctct
attctgatgccaacttctaggtcaacctgcagggggtgccctcaaactgcagctgcctcc
ctgggctcttttactacagtacttggaaggattattttactattattatctataattaac
catgcagtttattcacatagcatcttaagctttagacaccttttcttctccctaagtgtc
tttttatgttttttgtttaagcctcacagtcaccaaataaggtagcctgtatagagaggt
gaagtgactttactgagtttaggtgggaatcagtggtagagactgacctagaagccaagc
atcttgatttctagacctgtgctatttctacaagagttcttacaatgaagataataacaa
acagaaaacacttctgctattccttttattttcattctcctcttttaaactttgacatgc
tttatttatgtcagttctcctgagatcagttttcatgaaaccctagtactttactggctg
tcctccatgctcaaacaatgttgagtagaatctccagtcttgttctgatttattcagcag
atggagtattattatcaatatttcttcagcgtttgagggggcatttttggatgataaagt
tagtttccatttatcatcattttatccccagtgctggcttgggaagctttgatttttgtt
gtatgaatgtgaactatgagattgcattcaacttgttctgttttccaagccagaagaatg
gagaacagagtgcaaacatatatgatgggctttggcaacttagtggacattttcacttaa
agggaaaaccggtattccatcagatcgttatccttacctctgtagagctggaggcggtca
tagaaaacatttagtaattccagttcaaggcttttgttttcactaatgcagaaaataaga
ttcagagaagtcaggagattgtctgagatcatgcatctacctggtagcagtgctagaact
agacatcaggtcatttgtaccaggtctgaggcatgaggtctgagacactgtctgggaaac
cacagggctttgcacagactagggctggatacacttggagaacactcaggggacttccat
gtgattaattcagttcaacttaacaaacactgaatggggccaccacagggaaaacctcgc
agggcattgcgtggagccccaccttcccctaaaggctgactgggtatggccgggcaacag
tgttttttcctcagttctgctctgaggggcacaaggatcaggactcctgggatgttgcta
tgtctgcattggaaaagcctctcttaggaccaaagtcttgatctggatgaatgaggctta
agcttttcctttatttcctgtggtaactaaaagaaaggccatgaagaggctttcctacca
aatcacaggaagacgacagactaaggagaaggaacacactttgactgtggaagtcacaga
gttcttaaacccagtgagaagccctgttgttattaagagtggccttaccacagctgtggc
ttagaaatgggaaagaagggaggtgagagagacccacatgtgggtgtgtgtgagtgtgtg
ttgatctgcaggcatgtgctttggagactgagccccactgataccaggaaggcaggaatc
cctgctgcccagctgacaagagtgagtccctgcgggcctcctccttcctctctcagaggc
agcgatcatggtgggggaggaggcaaaattgctaagaatagccacagtctttgagacttg
ctcttttcaaggaatcaatagaattagaaatgagacatcagctctaatcagtcacatatg
tttgggttcttagcccctaggaaaagaatttctagctgtggctcctcaccacagctagtg
gagaaaatgcaacctggcaacgtgcaaagcacatctacacctgtggatttgagtgggcct
ccttctgtcctctggaaggctcagggacaaaagcaccccttctcacatgctgtcagtctg
acacctggtctgattggaagtggtcagacttctgagtaagcatcccctatgtggcttttc
aacaagtgtggaaaatttcaatgcacacataaccccaggcagagccacgaattggaggct
ggaggagatccccttcgctgaggcccccggtcctttgtcttatttgcttatgtttctgag
acatggaggtgtttggggaattaggtgcatagtgagaggatgttttggtttttgttttgt
tttactttttattctataaaaatgtaaacctaccaataagttgtgagaatagccaaatga
gcccccatgtccgcttcatgtatgttcactatcggtcagcaggttttcactgcaaacata
ggtttctcagtatggtttcctgaccacctacatcaccctcagacctcttatataggatct
cagggccaccggggctactgtactttgagcaattcctcaggtaatgtttgtgtgctgata
actgtgaactacccttttgaaagcctcacactgagtcaggtgtctgtgaacttgcccctt
agttctttgtgttaccaactccacaagctccaatgagtcaccagaatattgtgctaattg
atatcgtctctttaggtcctgccttactcttccagaaaaataaacaaagaaaatcagctc
ctttctttttctaaaatagcactcttctactcagcaactatgaatggcccttattcaaat
tccatagacctgcaatgaaaataaaatatcatattcagatttttgccaacttttaaatac
tataatttatgattcaccttgaaagctggtttcccttgaaagttgttttttatagccctg
ggctcgtacttaactagaaatgtcatctgtgaattatttgtgtataggtaatgagtgtga
atacatgcgcacacacaaagcactagtagagcttttaaatgtcaaaatttaaatattcta
aaggagcaaagaacaaaatcaaatttgtggagagattctaactccaaagtctaatctaca
gttgtttatattttgtggtctgtagcatgtcatttaaaaggaaagaGTTAAGGAAACAGG
GGAGGG
Primer
(+)CCTCCTTTGCCTCTTCCTCT
(+)CCCTCCCCTGTTTCCTTAAC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.