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Human element [ hs2733 ]


Position: chr1:3,250,625-3,252,990 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MIR4251 - ARHGEF16

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTGACCTGGCACAGGATTTAtttaccagcagcgtgagccagggcacagcctgtgattccc
tgggcagctgcttcctcagctgccaaacggagacaggctcacaaaataacccaaaccccg
aggacgagtgtttaccaggccttgagctttcaggaaagagggaagacagagcaggcacag
aagcttccagacgatgaactgcagcctggcccagcccagccagggattgccggggttgga
tgtaggggttgccacaggtcccaccacgtcagggacttccatcaggaagggcacaaaggc
cagggggagatggcgaggccaatgagtatgcccataacccacccccccacattctctgaa
gagagccccagatgtcactagggtcatttctgaagtgaagcatggctgaggaccaggtcc
tcaaattctggctcccacagggtctctgaggttcctggctggccgccatcaactcctctt
gtggggaggaaagcgggacagggaaccagcccttgacacctacaatggccacaatgcctg
ccttgcagaggctgtgcccagtggaggagaccagcccagcccagggcttcctagagacca
cggggctctgctccacaaagccaccactgtggcctccaccacctccaggttcacccacgt
ccttctcacggatctcagctctgcccatcaatcatcatcgccaagtgctcgccgggaaca
gagcaaacgaacactcaccctcactcagctcatttcactccaacagccatcctgcactgc
aggcatttttaatccactttatagatgaggaaacaaggcccctgaggtcgccaactagga
tcagcaatggcctgcgccttccgcggagggccatccacgcgtccaaccccataggatgtg
cctgtacgaacagcagcaacatgaccccataggctcagagccagagtccccagcgccagc
cccgccatgtcaagggcacagccagagaggacggggtggcagggagaccaggttcccccc
tgtggcttcaggagggtgggcgccctgagagaactcgcttcaaggcccctgtccctgcct
ggaaggagcccagcgtgcgaattccagctgccctgcacagccccagcgtcctgctctgag
gcctgagaggaagcgtgtttggggagctggtgtctgggtgcaaagggaagccagatcacc
acaccgaggaaggcacttcaaaggagacttttcacagccttccgcttgggaaagtgaatg
aaagaacgttattgactgagggctggggccggcctggaaatagcaggacatggaagccct
tggaggatggggaacagttcctcccctcagggcgtccgtagagaacacgtccttagcccg
gtcgcgttagcacgtcgcatgtccgaaagcgtgctcaacaggattctaaagggagcagag
tttatttcttttaacttttgactggccaatccaaacaaacaaacaaggcttcaaacagag
cattggaggatatctgaaatctaacctttggctgaggttaaaacacacacacacacacac
acacacacacacacacacacacccttggacataaatctgcaaataaactttccaaagaaa
aacacctacttctttcaaaatccagccttcttccccgttctttctggcatcctggtggaa
ggtgctggcctggcaggggcaaggaggactcaggagtccacagagcccagctgcccacac
ctcccctggcaccccagccacctctgcccaggttcacaggaggcccgggggccaagtgcc
ccatgctcctgcactgaagtgtgggagagctcagactggtctccatgaccagcccagccc
tgctcgctctctctggtcctcagaacctccttactgtgaactccgctccctgaagtcagt
cgtggatctgtcaggcagccccacagaggaggctgtgacgtctcgacagcctgcccagag
tatcgctgacgctgatgtgcagaaccccaatctccacagctgtgcctgagaacagtgaag
atgaagggagagagggtgtggggtctgactgctaggcccagcccctgcattcaggcttac
tgacctgccaagatagcgggggacatgcatatgtatcggtgtgtgtatcttatgtgcgca
tgtgtgcacgtgcgtatatatgtatgttggagtctgtgtgtaggtgtaggcatgtttatc
tctgtgtatgagcacgtgtgtgtctgtggctgtttgtgtacatgcacatgtgtgtacatg
cacatgtgtgtgtgcatgtggaggggtgtgtgtgcatatttgtaagcaaatgcatgcaca
tgtgtgTTGGTGTGTCTGTGCATGTG
Primer
(+)CTGACCTGGCACAGGATTTA
(+)CACATGCACAGACACACCAA


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