Human element [ hs2731 ]
Position: chr7:42,125,114-42,132,803 (UCSC browser)
Source: Lawrence Berkeley National Laboratory
Flanking genes:
GLI3(intragenic)
Timepoints:
e11.5
Expression Pattern
| branchial arch (3 out of 11 embryos) | | dorsal root ganglion (3 out of 11 embryos) | | hindbrain (rhombencephalon) (3 out of 11 embryos) | | midbrain (mesencephalon) (3 out of 11 embryos) | | nose (9 out of 11 embryos) |
Embryo 1
|
| Embryo 2
|
| Embryo 3
|
| Embryo 19
| Embryo 21
| Embryo 23
| Embryo 24
|
Fasta sequence
CCTGAGAACTAAGAAGGGAAAATtttattatccactcaaaaaagctaaatgatctaccca
gtgttgcataaaactatggccttatgatgcaagtttggtgctctttctattccaatacca
gagcacacaggacttggcacttcaaacgtgatccctgccagggcagggaaacccaggtac
cttcatgaaatgtcaatcctgctttggaggcggcaaccctgaggagctctcaggcagcac
aaatgcaagcctgccagagattgtcggggctcaggctcagcatatcaagaggtttaccct
tgtcttcacagttgcacaagagagaatgctgccatcaatcataaagaatcacttccagaa
atatttggaagtctctggaagaccagcagtatttcaagagtgtgctggttggcaactttg
tagcaattaagaaatgaatgaggcacattcattttgctcaaaaccaggcaagaagctctg
aaggattattgactctgcttcttttatctggaccatccactccatctgcagttcctgtca
atcaacaactaaaggtcttccaaggtttgccccataaatagtaattaataaaaaataata
aaacaatcttgatgagcacaagtgcaagtcactgaatactttaatgcaggtcaagcaatg
tgcaatgccttttagattcacctcatttatttcttcctggggcctgaccctgagaagcag
gtactattcatacgcccattcttatggatggggaaactgaccttctccagtgttacaggg
ggagacagtagtagagctgtgtgtctttcttacttcagaaccagggctcttagacattcc
acttcctgacacaacaatgtcagagttaaggctttttatcatagcttatctaaactatac
tccccacaccagcatccctaaaaccaagtctgaaccatatccctcccttctcccaaaatg
tatagtagcccaagatagcctccccactccagcccaagctcttcaccatgagtttgaggc
cccagccaccaagctctgtccaggacacctccccatccgagagtcagtgccccctcaggc
accatgcacttcatggcttatggtgtcccctcagttgaggacaaattccctcttacccaa
gtcttaccccctcttcaagactcaatacaaacaccaccccctccatcaggcttcccaggg
ggctccatgggatcgagtgctccttcctcccttctccataattcaggttggccagaacca
gtagggacgacccgaggaattctacttggacccgcatcatgtcctccccactgccttgcc
ctctgacggccctgtgctcatcctcagtgcgcttcctcagacaagcacacatttactgaa
tacagagcttataccaacacagccatgggggtgagcacaccacactgcctttcctgctgg
gcagtatggggatgagtccctgccagggtgcacacacccacaggtcagaactgtcttctt
tccctcccaggaggtctggggtgtgagggcagaagaggcccacttatccgtgtataccca
gcaggaactcaataaatgtatgttctaggaaaggtgaaaagggggaggaaagacatgaaa
ggaaactgaggccacgcaatgacagtggtggaccaggctagccatccctcctggaaactg
caggacacttccatctacctaaggggcctccaacaacaggcaaaatgaggggaacccaca
ggtatgggctgtctcctctttggaatcctccctgtgcagttttctgcatgcttcccatgt
tcagagtgagcccagggccaaggcccagcagatgcatgcacaccctggaccaaatcctag
cactctgaaaggcagcttccagcctgaccaggctgcctgccttctgctgggcagtgagta
acttcagtgagtaaactcaccaccctaccccatgccaccacctctaagacagggcagaca
ctgatgggcgctcagcaatcacaatcctggttgggaccttttgactgagaatgccctttc
ccatcagagaaacactgatggctccagtgaattcaggatacttgatcaggctgctaacac
ccatatggaaaaagctcttagacacaaaaggttggaggtcaaaagtttaaaagctcatga
cagaaatgacaggggcccctttgcccccaccaccacctactttttttttttttttcatca
ataacatcaaaggctctggcatgtacttaatgctattattgttacgctttggaatccatt
gaaattccagcatgtttactgcacactgggagcattaaaaggctccactttcttgtgtcc
cttaaactctgaaccctcactgtctaagaagcatcattgtttgcagaaacacataaagct
ttaaagcaaagagtttgttttaagggtttctttcaccatgactgtaaaacaataaagcac
acgacatggcttccttgaaaggatgagcaaggaaatgatagaaaagggagagaatccccc
gctgcttagaaagaaaaaaatccacttcacatttcttggctcatgggagtacaagtagaa
aacattccccatttttcttctatttctcctttctctgcaaccctatgttagccacaagct
gcacattttacacacacctcaaagacattggctatgtgagcatctatcaaatggtatcat
ctgaaggagtccgaaatacctttcttctttagaatgccttctcaagtccaccgtccactt
tgcagctacctcatactcattgctggatgtgcagataaaaagccccacagctgcctgcag
gctggttcagaactactccaagctccactctctgaagttcccactagtggcttcctctct
tgttggctacccttcccttcctcgcaatctcatctggcttcctattttgattcttagctt
aattccagttggaatgctgaatgaatttcagactatctctgaccgtccaccccttagagc
acctgctcctatggtaatgccttggatgtctaacctatgctataggcaagaggcatcctg
cctgggcctgcaagcccaccatgcccataaaaggcagaggccactcattgcccactcttc
ccctccatgattcctgcagtccagacaagctaatgtgctcagacacatcccagaggaatt
cagtttgccagcgttctgttttaggactggggaggatgataggcttgggggtgtcaacaa
acctattcagctgggctctgatggggactctcctctctggggaggcagtggtcctgaggc
tcctttcactgagcctaggccactggctgtctgctgcctgtgcttccctgaggcctcaag
ctctcttgcgcacttccgcttctgcagcctcagtggtgatctcactggcccttcatctgg
actcagcagctgcttaccttgtctaacaagactcaggctctaatgtgatctccatctgag
tcctctcctccctctctacaaagtaacccctggcttctagaccagtcttcataaactata
cttggtaggtatctgatgtcaatgatgtccatgtgctccaagtgcccctaaggacagaga
acatggtctgcttctggagtctgcatctataccttgtacgcctaggtccacacctacagc
cctagggactatagcctcaacacatggatgcgtaatagtggacacactcacacaaagatg
accccaatctgcacttcctcaatgagtttccactaatcagagggtgtggcctacactcat
tttgagagtgcaagactgcttctcatgcttctttgctgtttccaactgttactaatgact
tgaagcatgataatacgggatttaaacaaaacatttgaaacaaagcatggatttaataac
tgacactaggcaacagaccaaattgatggcaacctactggtcatcttgacaccaatatat
acttgtacagaatttatcaccctcaatatgaatccttagaaaagccatcctttctactga
gttttaccttctccaaaatcgggaaaaggccaaatactcagcacactgaatgatgcatgc
tgcaacccttggctgggtacacccttcccatgggaatttatctgctctccattttgccca
aggcagctgaaaaggctcccccatttaaagacgtattttctagatttctataaaaacaaa
ttacaataatcactacagccataatataaattttctttcatccgtaaaataaggctagta
agacttaactctgttgactccacaaagttgtacaaggccccaggtgacataagtgaaggt
ggttcataaattctgaataacagtcatgcatctcttaacaatgggatgcattctaagaaa
tatgtctttagatgattgtgtcattgtgtgaacatcatggagtgcacttacacacaccta
gatggtggagcctactacacgcccatgctgtatggtatagcctattactcgtaggctata
acggtacggtagcatgtccccatactgaatcctgtaggcaaccgtaacacaatgataaat
attggtgtatctaagcatatctaaacatagaaaaggtacagcaaaaatacagtattaaaa
tatttttaaaatgctacacctatatagagcacttaccattaatggagcttgtaggactgg
aaattgctctgggtgagtcagtgagtgagtggtgaatgaatgtgaagacctaggacatcc
ctgtacagtactgttgactttataaacactgtacacttaggctgcactaaatttatgaaa
agtaaagtgactgtactatgacgttatgatagccacaatgtcactaggtgataggaattc
ttcagctccattataatcttatgggaccactgtcttacatgtggtcagtccttgacctga
atatccttaggcagcacatgactgtacccatgtttaagaagtcaccgttccttctaagtc
cttcttcctcaacataaacacccaagttaccatgagagtcaacaactttatgtgggtgtc
ttcagctttgcaagtaatctgaaggttcaggtcatgcttctctcttgccctcaagcattc
tctgatcataagacccaggaagagtcctccatatctctgtccctaagtaaggtctgtggc
aaggacctcactctgtctcctgaacttcacactagacagacactgtcctcagcttaacct
tcagggaaaagaaaaaaagttacagctacaaatacgctcaaaaaagaactatcatttact
gagcactcacaggtactaaggactgccctaaacactcttcatatattttcttgcttatac
cacatgacaatctaaggaagtaggtattcatatgctattttgcaaatgagaaaataggga
tagagaaggtaagaagttaaagtcgctcagttaggaactgacaaagcttggcctcaagtc
cagatgtgcctgactacagtgctctgtaagctacagcagggccaactacccaggcatggg
gcctgtgcagcccctgggcctgtggtcagaagggcccgagcatggtttaatgttacgcgc
agtagccgtcttgaaattcttagtaatttttcaacaagggctccccattttctttttaca
ctgggcctcacaaactatggagctggtcctgagtacacctgtatttcccacaaaagtact
cccacttccaaccttctctgcttcacccttgccaacgacaaaagctaaaagctgctaaca
gacattgtcatgggtacactgggtgattgcacacatcctgccttcactgcccaggtacag
gtcccctacctcacccaggccctgcctcaggcttacactttggtccccttgccccagtcg
ctcagacacttctcccaggcaccagggacccagcctagcaggcagcaggcccctaaccag
gccagatctggcagaacacgggccagacatcaaccccacgacgatgctctcttgctgcca
ctggggcctgcgcacactgtgctaacacagtcgccatccaccggcctgctgtcctgaggg
ctaattgggcttgtttagaccgaacacagcagaagtccctctacacatatataaatcaca
attactaactgcaagaatccagccgctctcttctcccctcgtggctgctacagaggaatt
cccaggccagccaggactagcacaaaagccccagactgggctgcagcaatatccgctcgc
tcggctcagtttattatttaaacagttccttaacgattcttcccggaggtgagtgaggcc
aaactgttttccttccctccacaaagcagatatgcatggcttatttgaatgtcttcaacg
tttactttagtccccagttaaataccttctaccgcagagtcaaacaaacagttcacttca
ttagaaaggcaaacaatttagcaagagaataccaccagcacttgaggggaaccaagctgg
gcctcgaaaccctctgcctgggaagcagggccagtggcggcccaggcaacagtgcgtgga
gctcacttcaaaagcctttgcacaaatacttcacacattcactggtaattaacagataac
cccgaagagattatctgccctgcggccaaggaccctggaggattatccacaccacccgtg
caggagaaggcagagtccaagagcacacctttttctctgcaaatgcaagtggataaagtc
atctgagaaaacaccaaagcgagcagctacacctcccctaccccggtgaaaataataacg
aagcaacacctcattaagataattattaatttaagcaacagccggaagttgtgcctgaga
aaaacacacaggctggagcagcaagaggacacagggatggaaagttcaagacaagaacca
gggcaggagcgcaaagcccgtggtgtgctgtcaggattccagctcagaagtggagacaac
gctgttcccaacaaagacttggggcacactgaaaacactgtgggggctgaccatgagcag
gttaaagtctgggcacttctttgcgagagaccctgaggcagggtcagctgcccattgagg
tttgaagccatctgtcgcacagcaggcaagccccgactctcagtccagtgggcaccgcac
tgccccggcttttatctcagaaccacaggaggaacgcaccagagtcagctcttcagttga
ccaacagatgacaggttatacctatccatccagggcacaggatttggggctcatctttta
ttttatttcattttatttatttatttatttatttatttatgtatttatgtatttatagag
acggagtcttgctctgttgcccaggctggagtgcagtggtgcgatctcagctcactgcaa
cctccgtctctggagttcaagcaattctcctgcctcagcctcctgagtaactgggattac
agacacccgccaccacgcctggctaatttttgcatttttaccagagacgaggtttcacca
tgttgaccaggctggtttcaaacttctgacctcaggtgatccacctgcctcggcctccca
gagtgctgggattacaggcatgagccaccgcgcctggccaggatcttgtttttaaaaaca
gaagggcgcccagcatgggcaaatcacctgaggtcaggagttcgagaccagCCTGTCCAA
CATGGAGAAA
Primer
(+)CCTGAGAACTAAGAAGGGAAAAT |
(+)TTTCTCCATGTTGGACAGG |
|
