Human element [ hs2730 ]Position: chr7:137,663,156-137,670,422 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: LOC100130880 - AKR1D1 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TTTAAGCAGGTCCTGAACTTTCctatcccctccgtccctcctcctccctatgatgtctct gaccagcttcactccttcctgtgcctgactcctgagctcaaatcaaccaagatggcaggt ggttctggaagttggcaatggcaggcccggtacgatgtaaaggttaggaagtcatgtcat atcgttttcaaataatggtgagtgggaaaagaacgtaagacactggtcaggcagtgacac aggggtcaagaagctgagtgactcagtgtgctgtcattccccctgggtgaatgagaggaa ggggggctatcctgactagggcagtagtgacgcagctgaggcaggcagctgagtccccac aaagtttgtgttcttccaactcctagcccactgcagcactgggcacagagtgcggctcag gaaacatctatggaagagagccgtggatgaaaacctcaaggagaaacacacactcatttc accaactgcctgtgagggcctagagagtggccccatgcatggtgggatgaggcgaaggtc tgatggcatctcagagatgtgatctgagaacttggaagctgtgggacaaaactcaagact cacaacgagagcagtaaatgatgctactctgggaaaaagaaatttcaaaatagttgcatc ttaagtaattgaccatatctgcctggtgtgccctgctgacagaggaactagcaccaagtc tgagctcagtaggggaaagatctgtgttgaaaaacaagcatgttcaggacacacagtgag ggaagaatacgagtgctttgtgcctgtcatctctgttctaattgatcacagctctagcat attgtacccattttctttcatgaaacttttccttttagcctgattttcctgttcctaccc tccagggtcaggatggcaggctctgccaggctgaccaaataaagcacagcaagggcgggt catcaggccaagacatcaaaaagcacaggctgcaactggtcctaccagtccttagtttaa tataagaatgctgccggccgggcgcggtggctcacaccttaatcccagcactttgggagg ctgaggcgggcggatcacgaggtcaggagatcgagaccatcctggctaacatggtgaaac cccacctctactaaaaatacaaaaaaattagccgggcgtggtggtgggcgcctgtagtcc cagctactcgggaggctgaggcaggagaatggcgtgaacccgagaggcggagcttgcagt gagccgagatcgtgccactgcactccagcctgggcaacagatcgagactccgtctcaaaa acaacaacaacaacaacaacaacaacaacaacaacaaagaacactgcctggctctttcaa tctctggccttgagacatgctgggacttctgagtggacaggtataaaagggatcagtcag aaatggagacagcagggagcctgactcagatgtagaacagatccccaagaagggatccag gggaggccacatcagtttcttgggctccatctagcttgatctggcatcagtacctggtgc atgcggatgatgggtgagtccaatcagcctcacaggaggcagcagaatattctagccagc agttctcaaattttacatgcacatggatcatctggggatcttcagattataattcagaaa gtctagagtagggcctgagattctgaatttgtgacaaactcccaggagatgaatgttgcc agaccatggaccatgctttgagtagtcatactccaagccagtagttctcacctcggtttc actttggaagcactgggagagcttttaaaatgcctgatgcccaggcctcatcccagaacc aattaaatcagaatctcttgggctgggacccaggcatcaaagttgtttaagctcccaggt aagtgtgatgtgcagccaagactgagactctttgctctagaccgtggggatgggcagagc aggagcttcattgttccagtgggttcgcctggcctggggcagctcaggagagtggtcacc caggctgagttatgcaagtgaccacaggctcagttaaaaaggttccaaactggtgggggg caaccccaggcctagacaaacacaaccagagaaaggggaagagaagacttgctggtgccc agggcttaccccaagcattgcagacacctgtaaaaatcaggcctactttcagacttcccc aaccagtggcccaggctcctaaaatacatgacatgggatttctccatacaggctccaaag ctgctagagctataggctgaaggtcctcaggatttcaactgagagggaggagttgggaaa ggcaaactaggaaacaattttccactggccatcaataaaattcctcattaatttctaaga gtgaccagctcctctctttgcctctcctgctctttactgatgcactggcccctgttcctc cacaatgtgacccccctttgtcgccagctactccatacatttagaaagtcaattctgcaa tttccaaatgccagacagaaatcccctccaaagacccttaacgatgatgcacaccaataa tgtgacaccctccagaatgccaagatctgctgaggaccccgagtccttgcaataaagcag gagaacctgagataagatcccaagccctgagttcaggtcctcacacctgtcaggactgag caaagctctaggaaaaccggcagagttaaagcccagaggaggaggggaaggcctgcgtga atgaaagaaagaggagagcaaaggagacaaaaagggaaagagaaggagagaaaggagagg aggaaaagggagcctgggtggagaataggaaggtggagcatggcaaaggcctccagcatt ctttggggactggtcaggggtagcagtgacctagcctgaggataaacccagattctatga gggcctgtgcttttaaaatggattcatgtttaccaagttttaaaaaggactgaagtgact tagagaaaacatatcaaatgaggtcaaataaaattcaacatgggtgtagagaaggattag tcatgtgggagaaccaggaagtagagaacaagaaaaaataataagtatggggctagaaaa cagtccagaccccacagaaattaactaggaaaaaagtcacagaccaaaaatatataccca tgagtcccagccttgctcttgagatcagttagccaggcaggcagtggtttagctcaagga gggatgaatgaatgtgggggccagagccctccatttagaggcagaaaagccagcttctac tattgtctgctttgagtccgaatcttgagaatactccgaaatgcctttaataagcacagt ggtttttctggtttatgatgtaagacagccactcgtttcatgtattctccaaaaatagag tttgctccaaaaataaaaagtaaaagaagtcaacaaagggttaggtttcgagtacagagg cacagggcagcttttgggggaagagctctctctctttagttcttgggcagtaagctcacc tgccagcagtcagggtctaattagtgcccagcagcaagagggagcagagcttctctggaa tgctccagggggatggggctgcacaatgaggtggggggtatgctggtggtggacaccagt gtgcacagacctgttccttctcagcttctactttagaggtacagtctctgggacattagc ttttaccactgttaggtcagcaaaccttttgaaaatgtgatgaaagacacacatatgcac tgcacatacaatgccctaaagagcatttccagaagttcccagaccctcttgaggccataa actcagcttaagaaccttcagtctgtaggttttcaactcccacaggtttctttcagtaga aaacacactgctctggtcaccgccatgagtccttgggaaccttatgaaactctagtgaac ccccagtgctatggggttgaattgtgttccctgctgatgtgatttggctgtgtccccacc caaatctcatcttgaatttagctcccgcagttcccatgtgtcatgggagggacgcagtgg gaagtcattgaatcatgggggtgggtctttcctgtatcgttctcgtgatagtgaataagt ctcacaagatctgatggttttataaagagaagttcccttgcacaagctctctcttgcttg ccaccatgtaagatgtgcctttcaccttccaccaagattgtgaggcctccccagccacgt ggaactgtgagtcaattaaacctctttcctttataaattacccagtcctgggtatgtctt tatcagcagcatgagaacggactaatacacctgcaaattcatatgctgaagccctaacct ccaatgtgacagtatctggagactgggcctgagggttaaatgggctgaaaggatggtgcc ctcatgatgggattagcatcttcattggaagaggacatagcaaaaaggaagaaagaagat gctgtctctaccacaggaggacatagtgagaagatggccatctgcaagccaggaagagag ccctaaccaggaacagaattagccagcaccttgatcctggacttcccagtctccagaact gtaagaaataaatacctgttgtttaagtcacccatctgtagcattttattatagcagcct gagcagactaatacacccagatactctcaatgccaaaatacagtctacctgttcccatgt gtgccataagagcctctgaaacactagtctccttatttctgccccctccaccaaccacac ggccctatgacaaggtggtgaatgccttccagaggactatctaccacacagccccaggac tgaggaggctggctgggccctcgaagaaggaatcttaaacaagagaagcaagggcagaaa tgcaacatcagagctaccaggcagtggggaagggaagagaggacagagactgaaacttca gaggaaacgctggtacagagctagtggtcttttagacatgttccaataaatctggctaac ttaatactccctctgcatccatcaaggaatccataagcactgttgactcaggctgttctt ctaaagaaaacacagcaggcttcaggcaggtgttgttaaattgctccaaccaggcaaagc tgctgactctcacttagtatttttacacaccattgtgagccgccaaataacagaccttta taaatccctggtcaaagtcaactcctccaagccaccttcccggcctggccactccgtttg ctatggcctttcttcattgttcgcatacctctctgctttacctctcccctgtggttgttc tgtccgccctactaggccttcactcctcaggggcagggactgagtcttgcatggcttttt cattccagaaggctggattccaggttctgcactcaggggcggcccagtcattattgttgg ccggctgcttttcctgagaaagcacaatcgggccttttgattcccatccgcacactgccc gctccctgccactctgctctccagtgaaggaacttctcggcccactcacattccaggcac agtttggggatcaggggatgagcagccacacccagaagtgccaaaaagtgccactgaggt ttttggctgaacagaagtagaaggaaataaagtagctcccttatctgtgagatgcaggcg tcattctcagccatctcacaggtcccgaccagaccttggattctacaaatttgggaaaat gttattttgggatgtggtggacactgctgcttgaccactcaatatccatcctacccgtct tccttactatcagacaccaattttattcagggtggcaagtattaagctaacacactcaca ccttcctggcctcttttgcagctagggatggccagtgaaacctaacgggaaatctgctgg aggcctcagagaaagccctggcttgtcctaatataggtactaccctttctgctttgcccc gtcactttcttccaccagtgaggctgatgttacgctggaagtgaagcagtcatcttgtag tcatgaggacaaaggtgacaaacagcctcacgggaagggccccgttggccctgatcaagc actacactagccctggagggcctagctcaggactgcttggttcatgagataaataggccc ttacatgtttaaattaccaaatgctcaagccaagtgacagataagcttgtcatcttcata cttttattcttcttattttgttgctcctgcagctttttgtttggtttttctaaaagcaaa cttgggtcgagtaatagttcctcaaaaaagctatgggggaataaaaaatctacctaccag gatatttttctttcggttggcaaataccaaagaacaaacttctccatgaaaggagtctgc gtttcatgaaagatcaaaggtctcaaagtctcccaaattgcaaactcttctacagtaacg tagcccagtagagaagagccatcaggcagctcattaaagcttgtcagcctcaatagctaa cattttcttcctttctcattgaactccattatcagcaatgagttttgcggggagctgggg gttttgtttgttttcttttgcttttacttaaaataaaaatgtgtaacttaacttccaaga gacattgagatttgggcacagttttcagtcagctccctcttcaaagacctactgcaattg ccaaagcaataataagacattatggaaagggggaagggggcccattcacacgccagaatc tccatataacctctgtttgataaaatgctagttggtccagataaatggaaggcacaggag agcaacttagaacctgattcccaagaaagcaggactcagagaggttctctcgctcaacaa tatgtacatcaactgcttgggaacagccaaggctagacgcagttcaggccaggggtcgga ggaagaacgtggcttaaatgcctttgctgcagtgtatggacagcattccaaaggtgctct gccaggaagccccaggcctcgtggatggagagcgcttcagcttgtccctgacactgcagg cagtagccctaccaggactgctcagtgccatcctgctgtcccctactcaccttcctgctg ttaacagacccctaaacaggtcacaatcagccccagaaagactattttcattaggaaaaa ataatgtaagtgacctcagtgtccagtgatagatggtgtttcaggaaatGACAGGGACAT GGAACAAPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.