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Human element [ hs273 ]


Position: chr5:93,649,881-93,651,432 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: KIAA0825(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAgCATGAAAGCAAAGGTGGCAATtaatataactttttgctctattccttcaaaaaatgt
gcagaagcaatatatctctctcctaacactaatgaacccagactaccaagccccacatac
acctcacatggataacagcagttttgttgtgctttggaaatgtcttacttcaaaagcatt
tcaacttgatgtggccatttaacaagaaaagtgagagaatgcatggagtttagaggtatg
ctgcaccaaactcaaggcaccatgttaaaaacaaaggcatctaatttttcccagacataa
ataataaaacaaaacaggagttgcatgcaaatttagtaacataaaatttaaggtgataaa
cagaatggaagctggcttcttgtttagtattcctcagttatcaccataattgctgcatgt
ctgtcatcactagcaaaagaaaaaagtgtctttctcagctgctcccctgcttgttttgtt
cgctgtattcttgtaaagtgggagaaaataagtgtcatttaatgaatagtgctattcttt
gtctgacagcttcatatctgttaggtgtaggaggcctactactttctttttctgataatg
tttttgacagtgtgctaaattcctcccccaaaaggccggcgtgtatattctgctaaaagg
ggcttcatctctcctgaatgggtgccctcttttaacccccttcagcttctgttcttacat
taattgagctgatcagattgagcatatgaatttgtctttgatgtattcgtatgtttagtt
gacgttgctctctctctcattggcagcggacagagctctcagacaaataggactgttgcc
atggtaacaggcaatagctagggatctcttgaaaaatatttttatttcaaaattcaaact
ggaaaattctcactggatatggttctcagttctaaacgtgtcatatctaatgatgaatgc
aattaggaatcccaccagtgttttaaataataaattagcctaattttctaggcctggcat
gatgacatacaaatactaaaaaggcgtcttcttttttaaaatccatgacaaaggacttat
taatgacttttgttcttaggatttcaaattaaaatggatggtaggctaatgatagcgctt
tctatctgctgaaaatcagaggcctagaggtaaacttattattttttttaagaaaccact
tcaagctgctgtaatatttggttatttcattttttaaaaagcgggtgtagaaatccttct
ataaatgttgaatgctatagcagttggtaaatctcagtggataaaaaatgcccatagcca
tttttaattactgagcatgagaaaaagggatggatggtgagcctaagttttatagtccac
tatcatcttacaatagctttcaaattcttagtatgttagtcgaaatacaaggaaaaaata
aaaataagtacttcattatgtgacataaattgtagttatttttaaaacttaatttattca
tgactatacaattccagttatattaattattaTTTCCCCCAGTCATACCATG
Primer
(+)CACCATGAAAGCAAAGGTGGCAAT
(+)CATGGTATGACTGGGGGAAA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.