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Human element [ hs2726 ]


Position: chr20:31,379,278-31,381,613 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: DNMT3B(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTATCCCCAGGAATGGTCtcttggttaaagtgtgtgaaaatcttctgcatctgatggac
aacattgtgatagacatggcacctgggacacacctgtaggtggatgttgatgatgtcttt
ctcttttaggtctctgcagacaaactggtggcactggggctgttcagccagcactttaat
ttggccaccttcaataagctcgtctcctatcgaaaagccatgtaccatgctctggaggta
acatgggatgagggaatgagggctaagccctgagagcagggatgaagcaagagacccaca
gaaacctagctcagtgttgccaagggtggtttggaggggacagggtggccagggaggagg
taaatgacaacataacatgatggccaccggattgggcctcccaacaaagggatttgagac
atcccagctgccacttattgggaccactaactgaatcagaaggaaagagcacgggcagtt
aggggtgcaatattcgtatcagtgaatgtgcttttccagagacctcagagccttcttatg
agggttggagttcacagcaagacagcagtggaggccagctgtcttctatctgtgggccgt
cttatcccctatgaaccattataccctgtttctcccttcaccttgattttttccccccac
ctttgttcagcatttaagagccaacctcttctcattgctaaaggcttcattagacactga
aatccttggtccttcatgtaggacacaagttaatgtccccatctttagggagataaaaca
agaaatctagtgccgccttatataagatacagaggagatgagatagtgctggctggggct
tctatatcttggtggtagagttaattctgatatgtctgccttttgagtgggaggtgacca
ctgacattccctagggggaagagatcctatttggtgcctgcatgaaaagatttaaccaca
accccccttccgaggcctctccctgcacaggcccctccttcctctgtcacataccacagc
ccaggacagctgtctggctatgaaagggcccagtgtgaaggggaatgtaggccctggctg
ggggaatccctgggtgtggcctggcgagcacctcctccccacccccccattcatcacaga
ctctgcctttgcagaaagctagggtgcgagctggcaagaccttccccagcagccctggag
actcattggaggaccagctgaagcccatgttggagtgggcccacgggggcttcaagccca
ctgggatcgagggcctcaaacccaacaacacgcaaccaggtgggaatgagtccccatggc
agcacccgctgcctctgctggtgggaccacttcttgggagagtcagccacccctgctgcc
ccacaccccacccagctttctagcagctggtctcaactctgaatgttggaaaaataggag
caggcatacgaaggctgtgccagctctatctggcttccccggccactttcttgctgatgg
tcacgtgcatataatttgtattgaatctgacatctgtcttgaagtcaggatgcagtgttg
actagcaccttttttattaaaggaaaaaatagttaagctatgctcatttgagaaaattgg
aaagtgttaaagaagaatatgccacctgctaacattttgaccagtaccatatttctccca
ttataagataactctggtttctagaaatccaggacttgtcttacaatccatagatttaaa
ggccaggcctagtggctcatgcctgtaatcgcagcactctgggaggctgaggcgagtgga
tcacttgaggcgatcacctggacaacatggtgaaaaatagaaaaattagcctggtgtgct
tggcatgtgcctgtggtcccagctacccgggaggctgaggtgggagaattggcttgagcc
caggaggcagaggttgcagtgcgccgagatcgcaccactgcattcaagcctgggtgacag
agcaagaccttgtctcaaaaaagaaaacagtccatacatttaatgtaatgttttttctgt
tttgttttgttttcccctcaaaagtggttaataagtcgaaggtgcgtcgtgcaggcagta
ggaaattagaatcaaggaaatacggtatttccttcctgtcttttgactgtgccctgtttt
ctatgcactttcttctgatttctttgcatataaaatggtcactggaaaagaatcaaattt
cttgaaaagtcaatctgaactccctccccactctcccctcacatcccaccctcacaaata
ccctccaggttaacgttgggttgcacatccttCCAGATTTTTCTGAACACTAGTTG
Primer
(+)TTTATCCCCAGGAATGGTC
(+)CAACTAGTGTTCAGAAAAATCTGG


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