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Human element [ hs2723 ]


Position: chr17:54,772,700-54,779,500 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NOG - C17orf67

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCAAGGAGTGTGGTTGCTggatcgcatggtaagagtatgtttagttttgtaagaaactgc
caaaccatcttccaaagtggctatactattttgcattcccaccagcaatgaatgaaagtt
cctgtcactccacatcctcaccagcatttggtgttatcagtgttttggatttccgccatt
ctaataggtatgtagtggcatctcattgtcatttcaatttgcatttccctgatgacatat
aatgcagagcctttttgtatgtgcttatttgccatctgtatatcttctttgatggggtgt
ctgttaaagtctttggaccattttttaatcaggttgtttgcttttttattgctgagtttt
aagtgttctttgtatattttgaataacattcctttatcagatgtgtctcttgcaaatatt
ttctcccagtttgtgacttgtcttctctttctttagacattgtctttcacagagcagaag
tttttaattttaatgaaagccagcttatctgttacttatttcacagatcatgcttttatt
gtggtatctaaaaagtcatcaccatactcaaggttatctagattttattctgtgttacct
tccaggagttttataattttatattttacattgagatctaggatccaatttgagttaatt
ttttatgaagagtgggaggcctctcactagtttcagtttcttgcatgtgggtgtccagtt
ttccagcatcatttgttgaaaaggctattagatcaatgcttttggattttagattattca
aaaacctaaagaattgaggttgtacagtgaggtcacttgagcagaaaggacatgaaggcc
ctcccaagaaggagcagaaaaacgtgccgtgactttgactagagccggagctgagaatgt
caggtggagattcattgctccagcaactaacgtggcaaaggtggacccaggacagctagg
gcctcaccagcttcctggtggcacacctgcatctgatagaatccccagtgggactggatc
taatatgaataagcatttggagggttgcaactataagttgaaactccatcattcctcttc
agttcaatgtgggagcgtagacaccaggaaggaaaggcaatcttctgatggagagacagg
gttatgatcagtttcagcttgaataacacaggaagcgtgggcttattttttagcttaagc
acgtgaagcaagttatatgaatgaaactattattaattaataattattatttacaatatg
acattattaccagtagcagccgacacttatcaagtactactatgtgtggagcactggact
atgcacgttgtgtagattatcacatttactctacagagctaggaagtagcagcaacgact
catttgacagctgaggaaatgagacccaaagaggtcaattaagttttctatagtcactct
gccagcatgcaacagggctcaggttcaaactcaacttgtctcactccagagcctgagtta
atcactattcatgtttgaaaatagagtttcttcttcttcttcttcttcttcttcttcttc
ttcttcttcttcttcttcttcttcttcttcttcttcctcttcttcttcttcttctttttg
aaacagagtttcgctcttattgcctaagcaacctctgcctcctgggttcaagcgattctc
ctgcctcagcctcccgagtagctgggattataggcatgcatcaccacgcccagctaattt
tgtattttttgtagagatggggtttctccatgttggtcaggctggtctcaaactcccgac
ctcaagtgatctgcccacctcagcctcccaaagtgctaggattacaggcatgagccactg
agcccgaccaaatttcttcttttaatagcagtgtttcagctggtttctgactgcaaagtt
ggctgggtgtgtgtggcttctccctctgcctgtagaaactccatcattcctctttagttc
aatgagggttatccaggatttgctggatactacgttctctgcctcaatgctcccttgcca
gatggccttccttcagcagtatattagtcaagttgggctgccagaacaaaataccataga
ttgggtggcctagacaacagaaatttatttcctgacagtctggaggctggaaagccaaga
cgaaagtctggcaaagttcggatcctggtgaggactctccacctggcctgcagacagctg
ccttctctctgggtcctcacatggcaggagaggggaagatttcttgctcttcctcttttt
ataaggccacagtcctattaaattagggtaccacctcatttaaccttaattatgtcctaa
agatcttatcttaagatatagtcacattgggggttagggctttaacttatgaatttggag
gggacacaatttagtccacagcaagcagttactttttttttcttttttcttttttctttt
tttttttttttgagacagggcctcactctgtcacccaggctacagtgcagtggcatgatc
gcggctcactgtagccttgacctccccagctcaagcaaccttcctgcctcagccttacaa
gtagctgagactacaggagggcaccaccatgcccagctaatttttttattttttgtagaa
acagagtctccctatgttgcccaggctggtcttggactcctgagctcaagcaatcctcct
acctcagcctcccaaagtgcccaggccagagcacagtagtgtgatctcgacttactgctt
gtgcctcctgggctcaattgatcgtcccacctcagcctcccaaagtgctgagattacagg
caggacccactgcacctggccaatttactctttttttttttttttgagacagggtctcac
tctgtcacccaggccagagtacagtagtgcaatctcaacttactgcctctgcctcctggg
ctcaagtgatcatcccacctcagccttctgagtagcggaaagtacaggcacgtgccacca
tgcttgtctaatttttgtatttttttagagatggggttttgttatgttgcctagactaag
gttattcttatattctttaaaagaatgaaattttccatgaatgtctactctcaggtatct
cgatgaccacagactttagatcttagaagcatcttagaggaaatcaagcctaaattcttc
tttattttacaaattaatacatgtgattccgagacattaggggatttgcctggagccata
cagctggttaatggcagagctgaaactagaacaaggtcttctgattccagtggtgcagtg
gcaccattgcaaggtcttggaggaacaatgatggtgatgatgattcaagaccctactgtt
tgacaggcatagtatgacttattttatacacaccaccttatttattcttcacaatagcct
ggtataatgggtactattatccacccatatagatgaggaaacaggctcagagaatgagat
accttactcaaattcacacagctagttggtaaggggggcctggatccaaattctgtgctc
ctttgatttcactatgctctatttccaccgaggaagtgggttccctggtggggccaggga
ggtggctctatggctatgagccaagattttaggccaagtcaaggtcatggactcttggga
tcagccctggggccaacaggctgccagaagtgacagaacgaagaaaggaaaggaaggaga
gaaacaggagacaaatcttgatggcttccccatattgccattgtcctacttggggagttc
caccttcatctgttttaccctttttttcctttaccttcgagctctacgtctctttatcag
taaactagccttgcagacaagtgcaaactgtgccagcccttaggctgcaaaggaaatgaa
gttggcattctgtagtcctcacctggcatgaatcacacacagccccaagggaccgggaca
aggctacatgtcagactgatggactattgtctggagctttgagagaggaaaaagggaagg
ctgcttgcaggagaaaggtgaacaggttggccccggcccaagaatgacagaggcgccttg
ctcctgccacccggctctgctcctctggcccaggaacaataacaaggcgctgtcaggaag
tgacactaaaatgcctttccccttatacctcgttcagcctctggcaaaaggaggttcccg
gagggaatatttttagtttgacaaatgaaagcctgggaccgaggacaggagggataaagg
gagctcttctctgacactcctggagacggggagatgatgagtcagatacagagggcttag
gcacgacttctcaagacattcctcaggcatgagcacaagccagccgctcgaattcctcct
gcaaggcccgccacccggcaatcagggcggaggggccgggccagaggagcagctctgctc
tgtcttcctcttggcacattgttggacagcagctttggaagatcaaagcagccgcctgtg
ttgctttccggaactgggactcaggaggcctgggttcaagtccaggcttcaccatttgcc
ggctgtgacattaagtgtcctcatttctccctttatgcctcagtttcctcatcaccaaat
tgagagtattataacaccttggaattattattatgaggttgtacatttggaaaaaaaaac
cttgagaatgcagtgtttaaaagcattggttttctgtattgctcccagtaccccatatgc
agatggactcaaaatctcacactggtggccacgtgcagtggctcacgcctgtaatcccag
cactttgggaggcaaaggtgggtggatcacctgaggtcaggagttcgagaccagtgtggc
caacatggtgaaaccctgtctccaccaaaaatacaaaaattagccaggcatgataaatag
gtgcacgcctgtaatcccagctactggggaggctgaggcacgagaatagcttaaacctgg
gaggcagtggttgcagtgagccgagattgcaccacggcaccccaggctgggcaacagagc
gagatttggtcaaaaaaaaaatctcacactggtaacaataataaccagtacctattgagt
gcttcttacttaccaggcttgtgccaacttctctcacatccaaccctctcaatagttctg
tgaggtagatctaatcgtttccaccttctagacaagtatactgaggctcagagaggtggc
atgggctgcctaaggtcacagagctaacagatggtaggctgacattagactccagctccc
ccaactctgaagcccacttttcttttttttttttttaattattattatactttaagtttt
agggtacatgtgcacaacgtgcaggtttgttacatatgtatacatgtgccatgttggtgt
gctgcacccattaactcgtcatttagcattaggtatatctcctaatgttatccctccccc
ctcccaccaccccacaacagtccccggtgtgtgatgttccccttcctgtgtccgtgtgtt
ctcattgctcagtttccacctatgagtaagaacatgcggtgtttggttttttgtccttgc
aatagtttgctgagaatgatggtttccagcttcatccatgtccctacaaaggacatgaac
tcatcattttttatggaagcccacttttcaaatccctgtgctgggaaccctcagcctggg
cctgtacccagcaggagaacaagatcaaggcagtgcgctgggccaggcacgaactgggga
gccagagggaggggaaggagcagaacagataaagaaatcggaggcggagccagggttcag
atgcagagcagcaagttgaaggagcagggaaagcaccaggggctggagcctggaaccctg
gcagctgtccacacttggtacaaacatgcttacggcaatatggtggattgctggggcagg
gaagggggggtgcacttaaaagtcagaatccgctcatctgattggaagagagaatgaggc
aactaaccatctgtagataggcttatttctcactttttaaacagctggtttgggtgggtg
ctcctagggactcagcgcaaagtcattgggtgaattctacccaaaatatgtaaagccatg
atgagcaacccaccccacaggccacacgtggcccacctagtgtcattgggtccatgattt
aatttggggatgaatagtaagaggccatcaacgtgtactgcctctcaaaaaattctgata
gtgatgatatttcttgttgttaaattcagtgttacttcactcattagcatccttctctta
cgtaagtgatctaactctcgagaaatcacttttaatcccctcgtaggacttgatacagtt
attttgttttaagcagaaaacaaaagatggctcttaaagtcaattattgtcttctttaat
tcaccctcaggaaggaaggagagggtgagaaagggaggaaggaggtaggggggaagaaga
gaggcaggcaggctaccactgatgttgagtctcaacatcctcaaactgcagaccatgaac
tcttttctctgtgcactcataggaaggtcatcctactgcctcctcggccaagctaaaacc
caagagacttctcaccattcctctctctccttctcccagggatatcacccccagcatcac
tgctagggcttaggatatcactagtattcccaacatcactcagtgtctccctagaagacc
tgtgaggagtctcctctcagacctcagtgtcaaggcaaacagcaagtggctgcttttacc
cgGTAGGTGATGTGAGCGAGC
Primer
(+)CCAAGGAGTGTGGTTGCT
(+)GCTCGCTCACATCACCTAC


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