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Human element [ hs2722 ]


Position: chr10:63,833,997-63,839,484 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ARID5B(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGAAAATCAAAATCATAAACAAATGtatttgtttgtgagggaaattagcaactattcttc
atcttcttgcacacataatgcctaatttcaaatccaaccttttgcttttaccataagcat
tccttggacaagattgtcaccctgcatggctgaggcagctttctttgcagggacttaagg
tgagctgtacccaagccagatgtacttgggcagatactgggtgatagctggagcttctgc
cttttttctctgaaggtataaggtagagtgtgggaggcttcatgttttgaataagataag
catgtgctttaagttaaggaccaaaaatatatcaggttctaaggaacccacctaatcata
ccatggataaaggctggggaaggaaaggtgagttacagttctgtgcacatcaaggacatg
attccatgtattcttgctcatttggacacccttggagttaatagatacgcaattcagaaa
gtcacaggccacatctcagaattgtatatttaagaggacccctagcaactccctagacca
gtgctactcaaatgagattttctgacttgtccatgaactgttttctactagcccataaca
agctaataagcacagcaattgcgaataagcattgatacacttacgctgaaatttgccaga
ataacattatgtctgttgaagctaataaaaacttggggcttgtgttttgtatgcctcctt
ttgaattccatttttctagtaattcatttttatggttgtttacaaaagcatcagtcagca
tcagatgggaaatttagaaaactcgtctttcacccaggtcagtggagaaggtccgctcct
acatcttggccacaaactcagatatttatggaggcaggtagcaaagatgagtgcaggggc
cacggctggaaagtgtgaaactggcacgcacagcccgggccagagagcccaaagggacca
gcccacactgttgctgtaggtagatgccgtctgtgcgcttcctgaccttctatgttttca
agatatttttttaatgtgaaataacctaacttacaaacactggctccaatatttaaaaaa
atattttatataagctaaatcaaacatgcccaggggcaaaatatagcctacaggatgcca
agttccacaaagactgaaatatgcttgacactaggctctccagcctctgatacagcgccc
tgcagtgggagggcctagaggaagcttcagggttccaggcgctcttactctgctctacac
actcttccgtgtgctgagcaaaacaccctctgtggcttcccattgaccttgccttgcctt
cggaggacgactcgccacatgtctgctccctttgctctgatcagcgtccaggagcttgtc
aaagctcctctttcacttcaggtcttcctgttccattcaaccaagcctcagagcgtcagt
aatggaccttcaccagctcggcttgctctcatgcaggcgcctccagtttgtgtcactcag
aatacccaaagctactccagatgtggcatgtagtatttctcaggatgcgggcagtgtcag
tctatcaacacagcctaagattacatttggaatgggcaagaagccctctcctactggcct
gttgcattttcttggataggatagatttgccatttgattaactgtcttttttatttactg
ctgccctcaaaacccaatcggtgttttttggacatctgccatgtgcagagagcactctca
ggggtaatgagaacatataaagcaaagagttgagaattggctggcaaacaatgaggaggt
acccttgccaccacattcatagctgagattgctaaaggaacaggatgctgcttccggtga
gcccgggttcagcctcagaattcttctcagtatggcatccccagggagccaccacgactc
attagaactggaagatgccatgatccttggtttatctaacccatcacaagatctgagtca
aaggccgtacacacatggaagagagttatatctatgtctgtggtgggcatggtggctcac
gcctataatcccagcactttgggaggccgaggcgggcagatgacttgagacccaggagtt
cgaaaccagcctggccaacatggtaaaaccctgcctctactaaaaaatacaacaattagc
tggggctggtggcacacacctgtaatcctgactactcagatgtctgaggcacgagaatca
cgggatgaatcacgggatggctgaatatgggaagtggagggttgcagtgagccgagatca
cgccaccgcactccggtctgggctacagagcgagactctgtctcaaaaaaaaaaaaaaaa
actacatctataaaaactagttttatgtaattaaaaaaaataagttcaacagggatcaaa
gaaggaagagagaaatttcaactgaaatgagcaaagtcccctctggaaaatgtgtataaa
aaggtaggggctgtcaggaaagtcctaaggctgaatttccaagtcacataccccaaaggc
aggtagtgtagtttatcctctcatgtctatgaactattatcctaaggtgcggtgggtaga
ctctgcccatcctcatccatggtaaggttacccagtcaatggacttgcatttcctttccc
aacactgtctttctcatggcagtcctgacctgtggcccctattgggcttacctctgcaac
acggccaccctgccactctcatctccctaaacccacagagggcatcctagccctatcaac
aaccagaagcccaggaaactgaaaacaagttgcccagagttaggctgactgaggttgtac
agcttctcttccatctacactccaccaagcttgttcttacagggctctgagtcagttcaa
tgcaaacaccctacacccagagtagcttcatcttgtcatctgtaaagaatttctctccaa
aggacagtcaggtaatttcatacacaagagccgcatagtctgtatcactcagcatgccta
aaatgctctgataactttccaatgcctggatatttcaagaaacttttagaaaggaaaaca
aaactctagccagaccctggagtagaaaaactggtttctattttaaaaaaataaacaaca
gcctttgaaaaaaatctctatttaaaaattcttaaatttgcctctaaatgcaagttgtaa
ttaatagaagttagagtttacactgttgagtgtaaaaacaccctcaggcacaaactaatc
aagtgtgtatgtcatgctgtaaactacagcgagttctttgtttgaccccccccaaaaaaa
aagcttgccaaacagcagtttttctttgtcgagctcctttattgtctcatttttgttttt
atcctacttcctctgtcccatcctttgaacctaactatagtatttaagaaaccttgcagg
tcccatgttttattgatagttttcatcaagcatgaatttaaatttgagaatagattaggt
gtcttagcccttttctttttgataaataacaaaaggtttctacttgtgattttctgtcct
cagggttttatcattaagattaaataactgtactctcaagcatgccactgcacaaacatc
ttttcagttatgtgagtaacagatgccttcacaaaggaactattgaaaattcagaaagca
tgtttccaaaaaagaaaagggaaaaaaagtatcatatgacagaagaatgtaattgtttac
cattaaagtatattcttaactcttccactgaaaacctcttggaacattttgtttttgtgt
aagttactacaaagtttgaccaaaataataaatgttgtgggagaactgttgaacatttca
gaagttctggaaccagtaggatctaacatgcatggggcttaaatgcaatagttgtttgcc
tatttttatattttgacactggcttccatcatttgtggggtacacatcacattgaaaaca
ctgccatgttggctgggcatagtggcttaccctgtaatcccagcactttgggaggccgag
gtgggtggattgcttgtacccaggagtttgagaccaccctgggcaacatggtgataccct
atctctactaaaaataaaaaaaatagccacgtgcagtgacgcatacctgtagtcccatct
attcagggagttgaggtgggaagatcatctgagtccaggaagttaaggctgcagtaagcc
gtgattgcatgagaccctgtctcaaaacaaaacagtattgggtttattattcttgaaata
atgttcatctgcccttgaaatggatccatacaactcaattctgaagtcattgggcttttt
tcattgagaagagtcattgctgcagttgttgctggctggcattgtagagggctaggcacc
atgcatggtctgtgttcactgtaataagcatgcattttaatccctgggacataacatcag
ccttccttaagtccattccaactttcttcaatgtggttgtcatttgaaaggcataggaac
aacattagtctagatgctcttacatgtggcatggagacatcatagaaagccccaaaggag
ctttattagggagaccatgggaagcttgggcttggtaagattaagtcctagaggctggaa
ttcatggaggatatgattctcaagtttctcttaccatccgatattaagttgggcatgatc
caactagtatcactaccttttgaagagctatggcatggttattgtagcatattgtaagag
tagttgcccagtgcccaagccatagggcttcttctgatgtaggaggttgaccctttgtgg
aatggctacatatgtattttataggcctgttgcctctgagaaaaggagaatgctcactcc
agtttctcaggtaactccttaggagctaggaattcacttaacccaggcaggagtgatctt
tcagtatctcctccgtgttggtatgtctccgtgttgatacatctgtgtatgaagatgcac
agccacctttttgagatgaagatagctggactagcagaggcaggcagtttggtggtcgaa
ctcaaaattttgacactaaatagctgtgtgccattgactagtcacttaatcgtttagctc
tgaacctcagttttgtcatccataaaatgagataaaataatatatctgtagatatttctt
tctgtaatggttgaaattaaagcatgcagagtgcctggtattaataagaatgtaatgcgt
ggtggtggctgttaatattgtaatgcctaatcaatatatatgaatgacctgaatgaggtt
tctctaccttcccaccttgcttctaacacagtcccctgaaatccatgtaactccagttca
ggaaagctgtcatccttgagctaactctctcacactgacacatctttatgggagccgagc
caccaccttgctgtgtccagtaccacgtacctttctttcttctcttcatttagggtcaca
cacactccggGACCATGGAGGGAGGTAT
Primer
(+)AGAAAATCAAAATCATAAACAAATG
(+)ATACCTCCCTCCATGGTC


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