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Human element [ hs2717 ]


Position: chr6:138,168,525-138,171,635 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100130476(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGATGCATTTTTACCTACCCTtggtctgtgaggattggaagtggcacaatgcaatgtatg
cggtattttgatataaaatattgaactaatattccagaaatacatttaaaatgttagatt
aaatgtgtaagtgaatgtgaaggtaaatggttcactggatggtgaaacagctaatctctc
aaattaagactctacagcatataaatatataggctgctgctacccaaaggacaatctctc
agtctctcccggagtacctcgctgccagatcaatcttctttaaacaccatttttatcaca
ggactcatgcttaaaattttcagagactccatttcccttccctgctgcaactgaagtccc
cccacagacttgcagtggcctttagaatgtgtctgggccccggctcacttctgctcatgg
aaggctagttctttcatgcttccattaacctatcgggctcattttcccacctccatgact
tggcccacagtgcctccctttcttggaaggccctcacctttctccagaacacactgggca
ttgtccctgtcacttaagaccgacctcaactctcagttcctccctggagcttcagcctct
ggccgtttcttgcctagttgttttaggctcctttgaattcctatagccccagagaaccac
aacatagttctcaatgtatactgtcctggattgttcagtatagattcttgggagttatac
acgtctcataatagataataaattcctcatcaaaccaaggggaacctaaaataatgtaga
tcacccttgtcttcccccagactatgatgctggtcaggttatctgtttactgaatgtcca
aacaccttgagaaatcattttaccttaagaatttcttttcaaattcaatatattttgttt
ctatttatttattttattttaattaattttttttttgagacagagtctcactctgtctcc
caggctggagtgcagtggcgcgatctcagctcactgcaacctccacctcctgggttcaag
caattctcctgcttcagcctccccagtagctgggattacaggcacccaccaccgtgcctg
gctaatttttatattttttagtagagatggggttttgccatgagtcaggaattcgagaca
ggatggtctgaaactcctgacctcatgtgatccaccgccttggcctccccaaatgctggg
attacagacgtaagccaccaggcccggctgaaatttaacatattttggaaaatatatttt
agcattgcttttcttgttttttcccctagtctcctgcgagtatatagttaatgggatatg
tttgggatgaattataaacaatccctttctagaatacatttactgccataaggatctctc
ccaagtcagttatttgaggtcatatgatatttacaagtgaggctggactagggataggaa
ttcctggtattctgtgtatttttctaactgactgcagtgactctcataacatatgaagac
attattacaaagtatgtttaaggcaattcaggacttttttgtgtgtgactcttatttaaa
caactatttccagtgattttcttggctgtatatcccatagaaattaggcaagctctgtct
ttgaatcgctgaaggcatatttcttataaaacgaaaacagttttcatttaaaaaaaaaaa
aacctctatgtattaaatccataaaaaagaaaacagaaaggaaatctacgtaacaaatga
cagttagttacgtgtgtgtggttaagggctcactatcattatattcataaaaatattaat
tatgtgcagggctagaatccaagacatatctataactccttaggaaataatgtacaggct
catagtcactaatcagctgaaaaaaagtccttggaaaatttagagaatgtgagattattt
tgcttaaccaagagaaataacactggatggtggtcaaagcttatgaacacagtttgtata
caaagataggcagttcatatatcattctttatcctttgagaaaaggtaacataacatttc
aaggttccgtgtcccttttgcaagtaaaaaaaaaaacaaaataaaaaaaaaaacgtggtg
gaggcaattctggaatatccaggaaatctgatctcacaaatgaggaagctcccaaatatg
ggcatagagtgagaccaattttccagtgcaaatcctctgaggtatatgcagttgggaata
cccttattaaaaattcctttcccaaatccagttttagaagatctgtttaattgctagata
aaacagaaaaaaaaagtctaaaactctttttagattactgatgggaaaaaacaacagtca
tgatgtggggaatcacccaaagttttctatagactcataggatccaagtaatcagaggca
ctaatttcaggagccctggttcaagtggcatttccttctgatccataacgggcacctttc
tgtttcatattgtctgtgcacagtccacatatgaggccagggtcatcacccacacagaaa
agagacaaaaatatgtgtgccacccctacccgcttctgaaaatgaatctacatcaaaatg
caggatacagtctgaacttgtacagtatgctgtgtgactagaccaggactctggctagag
aggttagtaaatgtgaaatacaaaggcaaaaactgttatttccatttgcacatgaatcat
atttgctacccgtcataacctagtgacataaaagtattgcaaatccccagagccccattt
gctccctggaaggaaatccctgatcccaccgtccccaagtctggccaagctaattttatc
cgaggacctagagagcctggggtaaagactgtcagcctggagactaagaacaaggatgca
gcagccagattgtgctgccacttaaagaaagcatggctttgggcatattatttaccctct
cagtctcagttgccttatctattaaatgggtttaataatagtgcttactttacaaagtga
tcatgggggtaaactaaacctacatattttctgcttagaaaacactagaccattgccaag
cagaggatattaataaatgctatataacTGTCAGCTATATTCATTGCTCTG
Primer
(+)TGATGCATTTTTACCTACCCT
(+)CAGAGCAATGAATATAGCTGACA


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