Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2714 ]


Position: chr3:14,256,904-14,259,575 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LSM3 - LOC101927565

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTGTGAAAATGGGATAATAATGGcacctacattttcctggcactgctctctcagaggagc
ttatgccatgatttcttcatagggaacatggggtaataaatacaaagttcctgacataga
aggaggttttctaaaagacactgagaggctcacctggtggcttcctgtcataaacctgaa
gtggcggtgggggtggctggagcaggtagcccaggaggtcctttaggctggcatgcagca
ggaagagcagagaagggggtaataatttgggtaaagataagggggagatgctcagtccac
aatgatgaagggcatttttttattttcttgagacagggtctggctctgtcacccaggctg
gaatgcaacaacataatgatggcgcactgcaaccttgacctcctgagcttgagcaatcct
ccagtttcagcatcccaagcagctgggcctacagatgtgtgccaccacacctggctaatt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtactttttgtagagacaggcctcac
tatgttgcccaagctggtctcaaacccctggcctcaaaaacaatcatccctcctcagcat
cccaaagtgctgggataacaggtgtgagccactgcactgggccaagggcataatttttaa
tgaaaattaaggcaaagaacagttatgggagacaaatagatgacagtatcaaggactttt
tcattagcaattaacaacaacaaaataaaacctcaaactgacttaagaaaaaaaaaaaga
gcagcgggagctgactgtagacatggctgcattcaggagcgcaggctatgccaccaagaa
tcggtcttgctccgtcccttggctttgctcaccctgctattgactccgttctcagtcaga
tgctcccctcgttcccctcgtggtgacaggatggcgcagcagcccctagtggacattctg
cagctcagtcacccacctcattcccgaaacgccaaccaaagccccaggattcattatggt
tggcccagcccaggtcatgtgccccttccaattactggcactgattggccggttctggtg
atgaagcagacagggggctgggaccctggtctcctgccttctttgagtttcctgacttgt
ccgttcgtcttcaactggcccactgttccccgggctcttaaaaccacacctcatttaggc
ctctggcaagaaatggctacatcctctacagcggtcttttgcattgacttggactcttct
gttggcttaaaggcagattcaggacatgccagttcagatagagggagacagactcgtgtg
tgatcctgggatggcagaggatttttcatctgatgtgccagttatggttaatagtggctg
cccgagggctgttttgcagaggatggtaaagctaagtccagactcggagggaaaagaagc
tgtgattgattaataatgtctgccaggagccccggagcagtcagtggtggccgacttgcc
gtgtatcggccaaacttcattgcagaaagagcacggatcacggaaagcagcagccctgtt
cacagacacctccacctctcagccctgcgatcacacgctagttacttagctttacaggaa
acaattctcccatttgcacaatgaggacgtgtatcccaaagagttgctgaaagaatcaat
agagacaatgtatgtaaactgatcacgatcctgcacggaaaacagaggctttggctttta
acagaggtggaaagtcatgttgtttttccaggggccccaccccaaaagtgcttgtatggc
ctaggacatctcaggaaattttttttttcttttttttcactttctttctttcttccttcc
ttcctttctttctttctttttcttttcttttcttttcttttttttttttttttttttgag
atggactctcgctctgttgcccaggctggagtgcagtggctcgatctcggctcactgcaa
gctctgcctccccggttcacaccattctcctgcctcagcctcgcgagtagctgggactac
aggggcctgccgccacccccggctaattttttgaatttttttttagtagagacggggttt
caccgtgttagccgggatgagtctcgatctcctgacctcgcgatccccccgcctcggcct
cccaaagtgctgggattacgagcgtgagccacagtgtgcggccgggaaaattttcttgag
ttcgaacttctttttttgaaatatgcgctgttgacacctggccttatcccttcaggcctt
cacagttcaggccgtttggccccgcttctcctcgttgactttcccaccaacagtgcattg
accagcaccaccgtctgagaactcacaaaggatctgatttaccttcctaggattccgtat
cacctcttcttacaccaagggacccagtgcatggcaaaagctgtatgaaagtgggcacat
ggccacagaacagacaggtttttccaaggaaggcatcagcagaagctgcttgctggctct
ttgctagaagcacagctaaggagcctgcctaggggagatacctggcacggttggcatgct
atactgtttttcattgaggtaaaattcgtataacataaaattcaccattttagccatttt
aaaatacaCAATTCAGTGACTTTTAGTGCATT
Primer
(+)CTGTGAAAATGGGATAATAATGG
(+)AATGCACTAAAAGTCACTGAATTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.