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Human element [ hs2713 ]


Position: chr3:4,647,344-4,650,025 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ITPR1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGGTGACTCGGTATAGAGTGGtccatgtaccatttctcttgcaacttctgtaaatttgca
gttgtctccaaacaaatatgtaagaaaaaatgaccatgagtgcccagctttcagcatcta
tcgctgaggcctagagtgtgaagctggcgtgattccactggcctttcctggtcttctggt
tgttctcctctctccacatcctctgcctcctccaaggtgaaatcagaaagtgaagtaggc
aacagggagtggggccgacatcagacaggaaagagagaagggatcgtggggaggaaaaat
cttagctttggctgtcaggtgggtctaaattattttaattggatcattaccatttgcaac
agtttccagaggcttgatcaactttttcttttcccaaatccaggagcaggggaaagagcc
ttccccactgaataaattttaaaacaacagtggaagacaaatatgttttctgattatgtc
atacaggttcttaatggtcaccatacccattgcacagacaaattctagggcagtactaga
atgaaggtagtgtttgggattctggaggaggcagtgacgaaccctgtgtggtagggtgga
gtaggatggaggacaaaaaagtcttcctttggcagtggaactttgagggtgagcttacag
caggatagatgaagggtgtcccaggtagaaaatggcactgatgctgctggtaacatggga
atacaatttgtaaaccaaaaggtatctgaggcaggtctcaatcagtgtgaaagtttattt
taccaaggttaaggtgatgcctggaaggaaaaaaaagaaacaaacacagaatcacagaaa
tagtctgtggtccttgcctttctccagagatgattttgaggactttggtatgtaaagggc
aagagtgtgctggaggggaggcagggagggtatggtaaaacacatgttgcaagggaaaag
gagcaggtagcggaatgttaattatgtattcgtctcatgctcagcctcatgcactttaca
taagataaagtgaacatagagtagctacctgtggagatatttaaccttttatctgtagct
atctgcttaggaataggaggaaaggctcttgcatgactcagctttcaggttaattttttt
cctttttggcataataaattggggtccgagtttttattttctttcacaagtttctggcag
agggaaggaaaaacttgggaaaggcacagaagagtgctgcatggtttacatttgtgagac
ctgttgtgaatttggaatggctggagtgaagtattcatgggggagatgttttaaaggaat
gaaactggagaagtgcaggggccacgtgagaagtctgacattcctggctaatattctttc
taccacaccaaacaacaataatatcgaaggcctctggatattttcatgggtgagctgtta
cagatgtgtcccgtcagcacttgggaatcaccctgattgctggcagtgacttgagtccta
gaaccttgttgctcagtgtggtctcagaccagcagcttgttagaaatgcagtctcagacc
ccacccagacttgctgcatcagagtctgcattttaacaggatctctagatgatttgactg
cacactaaagtttgagaagcgctgttgttagaattcagttatcctgcaggtcagtgtttc
tcagagtgtggttgcagggccgcttgccttagaatcacctgagtacttgcttaaaatgag
gattcctaggccacgcttccacccaggtccgtgtgttttaataaagtccccttataaacc
acccaatgggttcttcttgcccactgcccaaatggggccgattgatcaaggcaggggaat
tgcaagagagagagttttatacacatagtgctgactaaatggaagactggaggtttatta
ttgctcaaatcagcctcccagagaatttgggggcaagggttttttcaaaggttggttggg
gaaaggtgggggtggcaggcaatgggtgcttgctgctgatttgtgggggtgcagtcatac
gggtgtgggtaatggtcctctggtgcgctgagttgcttctgggttgggccactcaggagc
agttggcaggtccaggtggaggccatcagtagtcagatttgcaacaaaacttgaaaagat
acctcaaaaggccaatcttaggatctaccacagtgatgttacctgcagtagtaatgggta
agttgcatatcttgtgacttccggaataatggctgccaattgattatgtctacaccttag
cagaattcaggctcgtccatctgcctagcctggtagcctctcattagctttacaaagggt
tgagttttggggaagggctgttatcatttatactgtaaactaaatgtctcccaaagttag
ctttgcctaagcccagaaacagttaagggcagtttgaaggttaacgggaagatgagggtt
agccagatcagatcctccccactgctacaattttctcaatgttatacattttgcaaaagc
agttttaccctggcaattatgatttactccgaagtttgatttactccagaatcctctgga
gcattgtatcattttaaaaccttctccatgtgactgtcaggagcagccagggttgagaat
cacagccctacaggatttgagGCAGAGGTGTCAAGTGTAGAA
Primer
(+)AGGTGACTCGGTATAGAGTGG
(+)TTCTACACTTGACACCTCTGC


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