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Human element [ hs2711 ]


Position: chr20:4,683,261-4,686,161 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PRNP - PRND

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAGGCAGAAGAAAATCTGTGtctcgtggactcagttccaacccgtggtgttcaagggtca
cctgtgcctgctttatgcaccccaaatcaggctctaaaatagtctcaggtcctgtgagcc
ttagtgacacactcttctcagattcaatacctttgatctgaaaggtgactttgatttgtc
ataatcttccaactcattctctacatgtttcgacgcaccagcactgtgatgttcttggtt
atccttggcagaagttttctcctgcaactaatttgctaaaggcagggggtaatcagaagt
gacagtggttgaaatcacaggccaatatcttagcaaacgtctgtgttgtaaatggggaag
tgcctctggtggggtcttcaaggatcactccagcctggctagggaaactctaggggagag
gcacttgaaattattgtactcataggtcctagagagggaggcatgtcatgccaagcaggg
ggctggattggaggcgtgcccagggattgggtgcaactcagcgtgtatgagacagaaaga
gagagaactcctgggcaagtgcctttactgggagccaggatggaggacacaagcacaagg
tgtaaggggatctcactggtgtgtttgaatgtcactaagtcacagtcaggggaagacaag
aagtggaacttgtggcagggaccagccttattacactggcacctggttacctggacaggg
tgcccactgcctatttgtaggatgtcaaggtatcaggaaaatatgaagtttttaaaaatt
tacaatataatgccaacctcctacggtgatcagaggatcagctttgtattaaagatggaa
agataccaatcatcacccacaaaactactaaaacagaaagaatgacaaatacaattctcg
gccaggcacagttgctcacgcctgtaatccctgcactttgggaggccgaggcaggcagat
cacttgaggtcaggagttcaagaccagcctggccaacatggtgaaacccccattccctac
taaaattacaaaaaattagctgggtgtggtcgcacgtgcctgtaatcccagctactcagg
aggctgaggcaggagaatcgcttataaccgggaggcagaggctgcagtgagccgagatcc
cgccattgcactccagcctggcggtaagagcgaaactccgtctcaaaaaaataaaataaa
ataaacttttcattacctgcctataataatttctcaaaaagagtcaactgaggagactta
aagtgttcgaagcatagctacttgtaggaccagagtgaataatatccacctgtatctttc
ccaggcctcatgtttcctttgttatttcaaacgtgtgagtcatgcaaaaggaatttttac
taaaaaggaaaagaaaaaaatttaaaatgaccagcataaacataattgagttcaatcccc
cagaaagggttattcggagaacagccaggcgctgcccttgtttttccccctccccatctg
gggctaagaccaaaaggggtctgtctttggagggaaatctgggtctgtacagcttcccac
tctaaggggagccttaatcccagccggaacctgagcttctccaggcaaggcctgaccttg
ccgactgatctaagcattctgcgcttcattttcaccccagaaaggtgacttcctcctggc
tggggggctcctcccctaggactcagctcatcctgaactaataaccgcgttatgtccatc
ctttgttccgttctttgagtcccacccatgttcttcaggaaagctgcagctggtccacgt
gccttgcctgtgcttctgtagaactacccctcccttctctgcctgcagcagggctcctgg
aacttgaatgtgcacttgaatctgcaggtcctgactgtaggtctgtgtttctaacatgct
gctgggtgacgctgtgcccgtcctgtggtcggcattgtaacaaggctccgcgggttccca
cgccggagtctgcgtcagaaacctctggagggcttgttatacacagatggctgaacccca
tccccagagtttctgattccctagtaccagggtggggtctgagaatttgcatttctaaca
aattcccaggtgatactgatgctgctggtgcggagaggtcacatggaaaccactgctcgg
cagatgcaaaagaagcagaagccgccccaaccctgaaatactcacaaagctgctgtggag
accagacacctgccgggggaatgagagcctggggatcctgcctgggaggaagagagagct
gggagctctatgggtgaatgccaatggaggtgcaaggaggtgactaactcctgccgtctg
aaaatagtgaagcacagccgaggcctgaagcccacccttagtgagagatatagttaaact
tggaaatggtgcccagtcacttgaaaacagcacttctcagattcagatgtacacatgaac
cacctgaggatcttattaaaatgtgggttctgaggctgtagctctgaggtgagctcagag
attctgcagttctagaagcttccaggtgatgcaatgctgctggtgcaaggaccgctctct
gagaaacaaggacctagaggtccaggtcatcttggagagctgttctaaccctggccaaga
gcttcgggaggcactggggctcaggcacccggcaggggagtcttcactttccttgtctga
actctaagtgctgcctctcacacacaattcccttgtctggacccagacaacagaatcagt
gcagcggcttatctcagaactaaagacagttgactgcccctggggaagggagggctctct
ctgaggaagtctcaaacaccctgctgcaaaattttcaccctcaggatccccaatttcccT
GAACCTTAACAGACTTGCTTG
Primer
(+)GAGGCAGAAGAAAATCTGTG
(+)CAAGCAAGTCTGTTAAGGTTCA


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