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Human element [ hs2707 ]


Position: chrX:10,139,292-10,143,611 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: CLCN4(intragenic)

Timepoints:

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TTTTATGGATTGTGTTTTTGATGtcatttctaataactgtttgcctagccctaggttttg
ctcatttgtgtaggagaggtaaagatcactcacatgggtttacacaggcaagggcataac
tggctgaagaaatataaaatgccatgtgatgctgccttcgtttgggtccttgcagaagtg
gaacttgaaattaggtttctggtgcaagttgatttgggaggggagtggggaagtgagacc
aggaaaggaaggcagccattagggccgggctgttaatgtcacgcaatgggcgactggagc
ttaattccacactttggaaactctaggaaatggtgctcgctgtgtcatgggcccccaaga
tcacctctgggtctggtgatttcctaggagggctcataaaacttgacacatggcatatgc
atggctatgatttagtaaagcaagaggacacagagaaaaatcaacaaagggaaaaggctt
atggggtgaagtctggagaaaagcaggcacgtgcttccaagagtcctctcccagtggggt
cacacagaacatgcctactcctgcccatggtgagttgagacaacatgtgtgaaatgtcca
ccagggaaggtccttagagactcagcgcctgggatttgtattgggggctgctcacatagg
caccctctgcctagcacacatcaaaattccagactcccagagagaaagcaggcattcagc
atagatcacagtatttggacaaagagtttaggcacagtgagccactcttaccagctctgg
gaatggtgggaaccctcccaaaatacaaattcccagatgccagccaagggccaaccttgc
aaacaggcctttctaaggagagcagtctcaggtctgctatattacgtgttttctgcacag
gtacaaagcacatgccttgaaataatctcattcaagggacaagggagtaggacatttgaa
gatgtctggttttctccagactttgccccgcaagccttttccctcgggagtcagttcttg
agagtcatcgattaatacctattcccaataatgcacttcaggcatgccatgtaagcagag
ccaccttctgtgggtctcaaaacaatgacagtgaccttagactaagcgatatggttggaa
attagctagagcttactggaaggttttgagtgatatgagtggggcgctggcagcatcaga
tacagtagttattctagaaattggatggggacaacagagccatgtgtatagggtagttcg
catgcctggggtcgtgtggcagtattgtaactgtgaatgaagagaccgaggtcaaggctt
cgctctaacctccttaggtagatgcttccttcctgtgtctgctcattggaggaatgggaa
agtgtgtgtgtttgtgtgtgtgtgtgtatgtgagagagagagagagggcatgcgtgtgtg
tgtgtgtgtgagcattgtgggggcagaaaatcctggtacactagctgtattttaaacttc
cacttctaatctttcagttctgagcagcgtgaataggcagataaacaaatgtttgctata
gcctcaaacattcatgccagaacatttttttccctccttccacacaagtaaattaagaga
acagcggtctgttgtataatttgaagatggctattaatttgtgttggattgcatttctta
agcatgttatgttattcgaggagcaggagaccctggaggaggcgcttgtggggaagcttt
gaagctggagcaggaaggagtgaaatgacacagtctgatgacgatcacggtaatgcaggc
cttgcagcctggcgacattcttcaaaggcaactaactgcaagactgccctcttcccctcc
cctctcagacatctccaagaccctgccaaccgccagatgaaaccaatcttcctagagcct
cgtgtggtggtctcaggcatcgcttgggagtgccttagaaattcggcgtctcaaatgcag
tcttgggccacaccccagctctccaggatcagaatctgccgtttaataagaccctaaggg
atgcatggctcatccaagtcggagtcagatctcacccgaggccgcacattggcagcacct
ggggagcttttaaaaatgctgatgcctgggcgctgcctcagggaccccggtttaatgact
ctgggcggggcctgctccttgggctttctgaatgctcccacgtggttcggctgcgcaccc
cgggctgggaaccgtggggttccctggcagtacccttctggaattctccttccccagcct
cccagtcacgtgactgcttaatctcctccctctgtggctctttctctgtcctctgctcct
ggctccccgatttctgaaggcagcccggtctcttttctttctttgttacctcctggccat
tctccaaagtgcctctgcgggggcgggagcttgtgagaaattcgagcctcagccatgccc
cagacctgctgaatcagcacctgcagtttaaccagaagcccaggggatgcgcatgtgcat
tgtcatatgagaagcgctggtctaggtgacgtaagctgggaaagaaacccagggaatctg
ctggaatgtagggagcctgggctcaggaactggaaggcgtctgtctgggtctctggcttg
tttgttttctagctgtctcaacttgccactgtggtcatttggggctagatcactcttctc
tgtgcgggtcgtcctgtgcatttaggacgctgggcagcatctctggcttttacccacatc
atgccatagcaatccccctccccagaggtgataaccaagaatgtctccaggcattgtcaa
gcatcccctgggggcagaatggtctctaggggacactttggtgtctgcctctggcctcat
tccctcccgccatacacccttggtagggttggtggttccaagttagccactaccgtggaa
agagagacttcctttctccccctcgtccatgtgtgcggccctgcatgggtcccacgctca
tccccatagccggtcattgtgcctggtggtcggggcactgtcattggccagattgggttc
tgtgccacatctggggccaggggccagctttgttagcaattgaaggagactgggagagtt
ctgatggaggcacaaatggctattttggaccactctagcagccctttacggacccaagtc
ctccgctgacccttcacccaataacaagctcatttagcaaatatctgttatgtggcaacg
aacagctgggccctgttccagggcgggcattttataaacagtcttcaggaccatcctagg
aggtggtcttgttagcccatattgcaggtgagcagactgcagctcagcagggctggtgac
acccatggcaacctgcggagcccagttgctccctaattccccccaccctgtgccctgctg
tcagccctacctttctgtcacccccttgagctcttcctcccctccaggctgccctacact
gccatatagctggacgaattgtaaaaggaacactgtgtcatcatgcctctgctcaagtca
ggaaagactgttgctgctgtcatcttttgtcccctccccagtcccctcacctccctgccc
ctcagaatactctcctgacttctattgtgtttacgtctctacttttcattgtagatttac
caaagaattctggttcctgagctttgttaatttacttctgcccgtttttgaacatgatgt
aaacgggatcacacagagtgtttggatgcatccggattcttttgctctgtattctgtgtt
tactcattgcaagcatactttgggaagtgcttgagtcaaagggtgggtagatgagaagcc
actgaaggtgacagaggaatggccgtgggtcagagagggaattaccttggcattacttgg
gcagagctggagtggtgggctacgcagttaggaggttgcggtgacctgggtaggagctcc
agcttagggtctgaaggccgtggggaggatggcaggtgaggcgtggtaggtttgggaggg
ttgtcctgccttctctttctgacgaggtaggagttacaggttggaggagatggaaaaagg
gggaagcattcctcatacaggcttgttggaccagcaggagctgaaccagcagtcgtcttg
ggttgcagtgaagccccctctgagactaggggctcccagcaccaaggaactggcagccag
cagccagcagccactgaggccagcacctctcgtaatccacaaggttggaagaaaagcagc
tcggtaaaggctgcttgtgatgagtcactggggctcCTGGAAAATCTGTAAGAAATGAAG
Primer
(+)TTTTATGGATTGTGTTTTTGATG
(+)CTTCATTTCTTACAGATTTTCCAG


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