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Human element [ hs2703 ]


Position: chr17:42,645,262-42,648,021 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FZD2 - LINC01180

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACCAACCCCTAGCAACCActgatctttttactgtctccacagttttgccttttctagaat
atcatagagttggaatcatactatatgtagccttttcagattggcttctttgacttagta
atatgcatttcaggttcctccacgtgtttttgagaggtgacagcctgctggcagccctcg
ctcactctcggcgcctcctctgcctgggctcccactttggcggcacgtgaggagcccttc
agcccaccactgcactgtgggagccccttcctgggctgcccaaggctggagctggctccc
tcagcttgcggggaggtgtggagggagaggcgcgggcaggaactggggctgcacggggcg
cttgggggccagcgcgagttctgggtgggcgtgggctcggcgggccccgcactcgtagcg
gccagccagcccgcaagccccgggcagtgaggggcttagcacctgggccagtagctgctg
tgctggatttctcgccaggccttagctgcctccctgctgggcagggctcgggacctgcag
cccactatgcctgagcctccaccccttcctctcccccacgccgtgggctcctgcacggcc
cgagcctcccggagagcgctgccccctgctctagggcgcccagtcccatcgatcacccaa
gggctgaggagtgtgggttcacagcgcgggacccgcaggcagctccacctgtggccccga
tgcgggatccactgggtgaagccagctgggctcctgagtctagtggggacttggggagct
tttatgtctagctgggggattgtggatacaccaatcagcactctgtatctagctcaaggt
ttgtaaacacaccaatcagcacgctgtgtctagctcagggtttgtgaatgcagcaatgga
cactctgtgtctagctaatctagtggggacgtggagaacttttgtgtctagctcagggat
tgtaaacgcaccaatcagcaccctgtcaaaatggaccaatcagctctctgtaaaacagac
caatcggcgctctgtaaaatggaccaatcagcaggatgtgggtggggccagataggagaa
taaaagcagactgccccgactcagcagtgcaagcagactgccccgactcagcagtggcaa
tgtactcgggtcctatttctccggggggggggggggggggggggttggggggtggagaga
ggaagctttattctttcactttttggaataaattttgttgctgtttgttctttggatcta
cactacttttatgagttgtaacactcaccgggaaggtctgcagctttgctcctgaagcca
gcgagaccacgaacccaccgggaggaacgaacaactccagatgcgtcgacttaagagctg
taacactcactgcgaaagtctgcagctttactcctgagctagtgagaccacgaacccacc
aggaggaagaaactctgaacacatccgaacgtcagaaagaataaactctggacacgccgc
ctttaagaactgtaacacttaccgcgagggtctgcggcttcattcttgaagtcagtgaga
ccaagaacccaccaattctggacacattttcgtggtttgatagcacgtttccttttagca
ctgaataatgtctggctattccacagtttttcaaagcagattaattatgccctggctacc
aacttgcttgagttgggtggaacagaaaaacccccccaatcaaataagctacacgcacca
gatgtattacttacagataggcagcaagggacagcgtagcctaggactcagccagtcccc
cgaggctcacaaaagctgcctggggtgaatggagtcttgtcagtgtgtatgtcttgctta
cctcactagcaaactgccctgggttttgtatcctagggacaacaggacttggtgggctaa
aatgttgaaggacgtcctatttctttcttgttttctttttttttaaaggatattctattt
ctaggagggcctggaatagagctcaggctgtgctgtccagtccctcgttatcccaggatg
ctgcattcccagaacaatctacggttattcttgaatactataagtgagaaagcggagaac
tgggtggcccaaggccacccggagaactgtctggtaagtttattcacctatcgaagggca
tcttcgttgcttctaagctttggtaattataaagctgctgtaaacatccatgtacaggtt
tttatgtagacataattttttttttttttgagacaaagtctcgctctctttccccaggct
ggagtgcagtggcatgatctaggttcactgcaacttccgcctctcgggttcaagcgattg
tcctgcctcagcctcctgggtagctgggattacaggtgcctgccaccacacccagctaat
ttttgtatttttagtagagacggcattttaccatgttggacaggctggtcttgaactcct
gacctcaggtgatccgcccatctcgcctcccaaagtgctgggattacaggcgtgagccac
cgtgcccggccacctagacgtaaatttttaacacgtgggtaaataccaaggtgcttgatt
gctggattgtatggtaaaagtatgtttagtggtgtaagaaactgccaaactatcttccaa
agtggttgtaccgtgttacattcccaccagcagtgaatgagggtttctgttattccacat
cctccacggcatttggtattgtcagtattccagatttgGGCCATTCCAATAGATACGTAG
Primer
(+)ACCAACCCCTAGCAACCA
(+)CTACGTATCTATTGGAATGGCC


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