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Human element [ hs2665 ]


Position: chr3:128,177,164-128,179,169 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: EEFSEC - DNAJB8

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGGCTTTCACAGAATCCTTCTGGctgctgggatataaacaggatgaaagagggaaggga
ggaggccagggaggaggctggcgtgatgtccagtgggtgacaatgacccaactgggacac
ggccatcatcttcgcggggagctacactctgcagtgtcccctgcccctctgctgagctct
gcttggagaatccacgctgggatggggcctggggcagcagaggagcctcagcggactcca
cttagtgtgccgcacaaggtgcggccagcctcagcctggctctgaaagtagctcacagac
ccctcactgccccgcccggctctgaaagtggctcccggacctctcactgccccatctggc
tctgaaagtggctcccaggacacctcgctgcttcagacttggcccccagacacacagccc
agcctaaaagagactccaggaaaggccagaatggcctgccgcagcagtgcagcttggcaa
ggcctcctcaagaaagtgacacagagtgggggcctcctgggatgactttaacaagccgaa
ggagatgggaagggcggcccaggcacgggcaacagcgtgatgctgcagcagaaagggcct
ggagccagcagtgctgtggggcaggccctgggccttgagtgccgcgtgggggttggactt
aaccccagacgtgctcctgaggaagtcacttaagctgccaggcttcagcttctctgtctg
taaagtggggctaaaggtggacacagggattccgccaggtgtcacatgctcggctgagtg
ggtcagtggctggggtcccggaggcatttgagcaggggatgccatgtcgggtctggttgg
agagagctggtgccagctccaggtgtgaggctgggcaacaggaaggaagcagagagccgg
gagtcctggggtgtttggggaccggtgctgtgcaagcacccaggtttctgctgtgcaccc
agcactaggactgtggccgcctgggctgctgggctgtaattggatttgctcagcagctgc
ctgtgctaagcagacccacttgacgcagccacagctggccagtaattggtgaaattagca
agtcggcggggacagaggtcaggtggttaatgctgtagtgggggctttgatgaagttagt
cccagggaaggactgggacctggggtttgaccttctgcgtgtcacagggctctcctgccc
tgcctgtaacgtggttaggggacctccagctgccggcttgtcccaggggctctcagaggc
agaacccagggagccacaacctggcccgagcctcaagatgcagccgcagcgccaagttgc
cgactgtgtcctctaggccgagacacatgctgaagccaagggagcctttcaagccctaaa
gatcttggggtgatgccccttgtcttcctggaagaggacttcagcaggcttcccttggag
aaaagcagcaggcccacctcccagcctctccatccctcgtgagtgcccctcagaccagct
ctgcatctggaaatgggatgagttcttcactgggtgttccccttattcaaccaagcctca
ccctcccggctaggttaaaggcttcccagtgtcttctcctgtcctgagctccagagagtg
tcctctgagcatgctgcttggttcctgctcttccctgacacagtgctcctcccttctttc
atttcatatcatttattgggcacctactagatgccacgagctgggctgggagttgggatg
cagaaatgagcaaaatctgaccagatcctagtcgacttggtgctacgccttttgtggcca
tgccacatcaccttgccccagccagggagccagagaccctgtcactgaccatcctttaac
ccccaaacctggaatcacctcctttttggcttctactccagccccaaggaacaaggaatt
gccacctgcactcaagcactcaaacgcatctccctgggctgtcaccgccagcatcatcat
caTCATCACCACCATTTTAAAGGCAG
Primer
(+)CAGGCTTTCACAGAATCCTTCTGG
(+)CTGCCTTTAAAATGGTGGTGATGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.