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Human element [ hs2587 ]


Position: chr22:23,646,422-23,650,174 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FBXW4P1 - CES5AP1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGCCCCTGTTCCCAGTTATagccactcccagacccaagccgatctgctttttgtcttta
gagatttgcccattcttcacatttcataaacgtggaatcatactagagtgggcttttttg
actgatttcctccacttaccattatgtttttgaggtttattcatgtggtagcattgtttg
gttcctttttatgataataattttccattgcatacatataacatgtttttatttctgcat
ttactatttgacagacacttggatcatttctagtttgggctgttaaggttgatgcagcca
cgaacatgtccttggtaccagtctctatatggacgtatgttttcattcactgagtaaaca
cctagtaagattgctgggctgtgcaacaaggtgactatttggggaactgccctacgttgt
ctggagtagctgcaccatcttacatccccagtggccatgtatgaaagcccatttctctac
atcctcaccgatgctggttatagtgtatcctaagggagaagggtgtgttccttttgaagt
gatgttagagactggttgggatcagagaagagaagcaaagagttaaaagtgggatagagg
ccaggcgcggtggcttacgcctgtaatcccagcactttaggaggccaagttgggtggatt
gctttaggtcaggagttcaagaccagcctgaccaacatggtgaaacctcgtctctactaa
aaatacaaaaattaaccgggcatggtggcaggtgcctgtaatcccagctcctcaggggct
gaggcaagagaatggtttgaagccaggaggcagaggttgcagtcagccgagatctcgcca
ctgcactccagcctgggcaacagagtgagactccgccttaaaaaaaaaaaaaaaaaggtg
caggatggatctcaggagagcagattgtggtcatagactacagcaggaggcctgtaatct
ctctcctggtgaacacagaggttctctggtggtctcagcaaagacccacccccgggagta
ggttatagtgcagacacatggggcccagacaggaacaactggggttgccctgctggacca
tccaggctggtgacgatgggcgtgaaggaagctgttgtctacaaggagctaagtgaacaa
gcatttcctcctttggaaggtttactcatagccccctccctgcccctgctgagggtgggt
gagaggatgtcctccggctgcccattggtgactcaatccagccacactgactacaaagca
agcagggcagtgctgggcccccagcagagccaccatgcaaagtggtcagtgatgcttcag
ggcagcacacagcacctgccccagttgggcttcggcctccctcagcccccaccccaccac
ttccctgggatggatgtgcacgatagttttctaggcagacctctaggccaccatctgcca
ggcccgctgaccatagtcattctttcaaggctcctgccttacccagtccagggggagagg
agcagcaacctggtccatcctcctgagaccactgcatgtgagcagacagacccctgcctg
cccagtccccggccaggcagcaggcatgttcctcaccaagaccttgcaacccagggggac
cctggacagcatccggagtgcctcggtttttcccttaagggaaaactgtttcccccttgg
tcatctgtttttccaaaccccagtcttttgcttgtttacttctctggtgctttaaataac
tgcacgagagagcgtaccagccttgagcaatgtttgggattggctgagctgaggcacagg
cctcattatcatgctattctttatacggcttccgctctgcggcgcacactctgttctttg
gaacagagccagccttgggacagcctttcccactggagctgccagtcaggaccgccgtga
gagccagtgcctggaggccaacaccctggtcttcagtcactgggagtcacagagaggggc
ccgataaagagccctcctggcagcatcagtaccaggttggagtgggcgctggacaccacc
aatgctggggagtggacgctggctggagccccacccagggctgcacattgctcagccagc
tagctctgggggagcaggacctgagcagggtgtcctccaccctgggtccatcagaggcac
tgcatttgattattggggttacctgctgggagtggtgcagattttggacagtctggattg
cttccagcacaaggcaggctgaccagtcatactttactcagtctccaaacttgggcaaca
ggaaactagccacttgagaaggaagctcagcttttctgggctttagaggagatggagaca
cgttggaaattcccgtaaccaataggctggggtgggagggtgttcttcccacacacacac
aaaaaagtggaacccggaggtgatgggaagctttgaccttggccagccagactgcggggt
ggggtttccctcaaagcctggtcaaaaggccttggaggctggaagctctcgtttagcccc
accagcttcccagagcagcaaggccaagcatgcaagagtcaccatccaccctggccatga
tgcagggcctcctttggtacttccaccccagccgggcgggccggagccgggcggcctctg
ctgaaaagcacctgtgggccgtggttccaggggggctttgaggggcagccgctgatgtct
ggacagcttctctttctgtctcttcttacctggactctgggttgcttgttagctgcttct
gcctgttctgggttttcaaggggagaggggcccagtgatggctgttctttgaaggaaagg
taagaatgtctcctgcttaacatgtttctgtgtttccagttacttggttggttagtagag
ccagggtctctcgctttgttgcgcaggctggagtgcaatggcatgatcatggctcacagc
agtctccaccttctagcctcaagtgttgcccccacctcagcctcccgagcagttgggact
gcaggcacatgccaccatgcttggctaatgcttttgaaaattttttttttatagagacag
ggtctcactatattgcccaggctggtcttaaactcatgggctcaagtgatcctcctgcct
cggcctttcaaagtgctgatatcacaggcagggtttccattttttaaagctcccagcagt
ggtataaactcctcctttccagagaaagcgcactctgtccgcatccctcatgttgtcctc
tcctgcctctgcttagggttcactccgggggaaagtgccacttgagagtttcctttttat
gtgtggttctgactgaccgctccctgctcacagatgctgcttctcagggtggggtccctg
aggcctggagtgtggcctctgacgaccttcagggccaggtgcggaatgagagcctgtggc
cgcatggcccccggtgggagacgtcccgccgccctttgcttctctgtgccactctggctg
cacagttcagagccttgggaaacgttaaccagtaggacctagaaggggaggtgagaaggg
gtcaacccccaggtgtgcctgtggtgagccttcgtgctgagcaggtgcagggagggaggc
ccaggtgcacacacctgtgaagtaggggggcagctggctgggctccttgacctgctccag
agcttcttattttctggccacttcacctgcagaaggcccaggtggctgtagccgctaggg
tcccttgcagtggAAATGATGCCTGTCCTCAGC
Primer
(+)CAGCCCCTGTTCCCAGTTAT
(+)GCTGAGGACAGGCATCATTT


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