Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2584 ]


Position: chr6:17,224,764-17,228,718 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: STMND1 - RBM24

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CGAAAGGCAAGAAGAAGCAAgtcacatcttacatggatggcagcaggcaaagagagagag
cttgtgcaggggaactcctctttttaaaaccatcagatcttgtgagacttattcactatc
atgagaacagcataggaaagacttgcccacgtgattcaattctctctcccaccaggtccg
gcccacaacacgtgggaattcaagatgagatttgggttatacagccaaactatatcaact
atattctcatgctgatcccattcctctgtgggggtcttcaagctggctggtgtcagcctg
tcagctatttcattggaattcgagatctgaaaaacatcttaagcaattctcaaacaaaag
ccttatgattctgtcagaaatcctatctgtaggaataatggggatgcaaatagtcaatat
ctagtgctacctgactgttggttacaaggaagtgagtcaaagtgcagcctgatttttttt
tttttaagagacaggttctcactatgttgcccaggctggagtgcagcagctattcacaga
cacaatcccagtattgatcagcatgggagttttgacctgctccaaaaatacagtctgatt
aatgcttaattagaattatatttctgtccagaattcttgttaaccctgtaaggacggctt
ctatcctattgacatagaccctaatatttggcagtacagatattttgtttcaccctcaaa
gtattggtcaatggtcccaaacttgaagattttacataaatcttcagatttccaaaagtc
taaaagatctgccaatacagggcctttgagatatttggctgaagctgagctgtggttgcc
cttttagtggaagcctccagattgcaatgctcccagcactcccccattgtcctgggtcca
tttattatatcatcgctgtagtttttcttctaccctcctatttctttcactggtgtccat
ttgagtttgtgacttttgccctggccatagacagcattaacaatgaagcagagcaaacag
gtaaagctttgggctatcctactacttctttcaaaagttttcccctgattttaactcctc
tcccttctcttcaaatccagaaagttagtgttttcttactgtcccaagttttctttgcct
ggaagaaagaaatgtggtcatcctattcacactaaattgttagtgatttaatatgtcctt
ttggggaaaaaatagccaggatttgctaacctttccaaatcgtaaaattccagctatttt
ggcatttggatgagtgacacattttggggtggtacacttctctatgacccttcaaaccac
agcttgtggacaattactccttctccattttatgtcagccagcaaaaatgtttgccaaaa
tgatcagaacagctgttcatttttgcttgtcagggtagtggcttgccagggaatccctgt
cccagttgggttcttcctgggagaaatatttacataatttgttcctattctgggatgggg
tgccctgtgtgttttagcctaccagaagtttactatgtgctaatggtgtggtgtggctat
aaaaaaaaaaggggtgtggcatggggaaagaaaagaaaatttgaacataaacttagccaa
atccatagatagaaaaagcacaggaagttgtttcactgtgctctgaaatcttaactcaca
tctggggatttgtacagattattcggggcatccacatttagagaagaatgctgacaagtc
aagggcatcctgagaggggagaggtgaaaactaaaccaagagtaagagaagactaaagaa
gcacttggtggctgcttgcaaaggttggaaaggctgtcaccaagaggaggaaccacatgg
attagttctttgttgtgccaaagaacaaactaagaccaatggatacgagttaaaggatga
gagtgggaggagattttggctcaggaaataaatctaacagctactagatagagattggag
aaaaatgactttccctttcactaaaaatatcctgagagaggctgtttgaccatctgtttg
gaatgctatagaaagaatccttaccctggttggtggcctgatttgatttttgttgggact
cttcagagcaaattctacgtttgtatgaattctgcttgcatatcctagagaacatgtaaa
tccacaaatgcagaataatgtctctacctactccatttgaacttcagtatcatcacttag
gtgcaattacatcaatgttctctttcagacctagtatctgtattactgaagtcagtgatt
tctgcagtcttctcttgatgccccttgggtgagcatactttgtattctttgttgtcagta
agcatgtgaaatagattttcactcagcagggtttttcctaattgctcttgcaaagaaaat
gatgtggccaattgtttattccattgatagcctttttctgtccccagaatgtggccaaca
tatgtatgactcacattcacaggacagaaggattgttctggcttgtgcttctacttcttt
tagccaattggagagttatttataaacatttattgatttggattcataaaccaaagtgaa
aaaaaaaatcttgcagcactggttgctatggtaactagcatttcacacatgtattcgcca
gcagcgatggctcagaacagaaacccaaagcctacctgtagcttctaactgcattttcac
tcctatcgcatttttaactgaaaatcggtgacttcctccatcagtgtcaagtgggagcat
ggtatggaggcaggaaaacaacagcttttttcatttatttttgaggtgatttctgtagtt
ttcttggggttattttctagacagatgtgacttctaatcaatgttgattgtcaagaatta
aagagattccatcgcaagttcagctctctgccacgtgttgacggtgatatggaagaaacc
tgggttccattctttatcttcaagggaacttatactatagctagaatccaggagcacaaa
tataaagcagcaggcaggctacacaagaaaaaaaatgtagttcagtgctaaaatacacaa
catacatgataatagacgcaaagcatgctgggaggagcacaggttgcagaaagagacaga
actactttgaactgtgtggcctcctgtaaattacatcactttcttgtaaatttttacatt
ttttataactcattgaaatgagaaccatatcagctcctagggtactcctgttttgttttg
ttttgttttgtttgttctgttttgttttgttctgttttgttttttgagacagagttttgc
tcttgttgcccaggctggaatgcaatggtgtaatctcggctcactgcaacctccgcctcc
cagattcaagtgattctcccgcctcagccccccaagtacctgggattacaggcatgtgcc
accacacccagctaattttgtatttttaatagaaatggggtttctccacgtttgtcaggc
tggtctcaaattcccgacctcacgtgatctgcctgcctcggcatcccaaagtgctgggat
tacaggcgtgagctaccatgcccggcccctagggtagttgtaaggattaaataagataat
tatataaagtacctagaataatatcagacccatagcagcactcagttaatggaaattatt
atgtgtgttgggataattttttgagataataaatatgtcttgtctttgccagaagaagat
cctgattgtatggggaactaaagcttacacaattttttgcctctattttaaaaatgcaat
aaaaacataaataggccaggcacagtggctcatgcctgtaatcccagcaccttgggagaa
ctaggtaggaagactgaggccaggagttaaaggccagccttgccaacacagcaagatcca
gtgtctacaaaaaataatttcaaaaaaattagctgGGTGTGGTGTCTTGCTTCTG
Primer
(+)CGAAAGGCAAGAAGAAGCAA
(+)CAGAAGCAAGACACCACACC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.