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Human element [ hs2582 ]


Position: chr2:157,255,787-157,258,271 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NR4A2 - GPD2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTGTCCTCTTGGACATTGCGtattatatttgaattagatcagcctgtgtcctgttctagt
ttaaaccaaaattcaattatgagccattatttgtttaaattactgtaagcaaacacaatg
gtttatttatttttaattcagaagttgattgtgaaacttgtggtttgctcagaatgattt
tgaaatctctgttttctgctctggctctcggcttgctgaccaaatggtcatttatcggga
gtgctctgcaactgaaggagtggaaattctaggccctcacggtgctacctgttggggcca
gccttacaggtcagctggaagtgacggtgacccagctacctcgacaccagatctctaccc
tgctcccatcggagtgtctgaggcttccaccactcagctttcaccaggctggggtggtat
cagcttaaactacacctgaaaaagtcaaacacacctcatctgactatactgcaagtcagc
acatcgatttacctagcactcagccaactggagaggcaatttcagagggaacaggactca
gggtaggtcttttaatttggagcttgggtaccattagtggttagagagggttcagaaggc
atcaaaggagatgttcaatgacttacactacgatcaccacttaccaatccgttaagactg
gcccagggtgtgaatatcaaaaggagaaaaaaaaaatctacctggagcaagtcccctgcc
ccgatcttatcatagtttatatatgactaagctacagggagggtggtggtgtcatattct
ttctttcagtttgagcctcatgaaaatgaagagcaagctgcaaatcatttttatctgcaa
ggggttatctggctgtaacccttacataagcaaggtatggggatttggtgtgaacacgtg
gttttcctgagatgtgcatttattttcgggggtgaagagtgttcaggtaaatccataaca
ttttcgtgtgcaaagagaaggtctccacctttctgctccatgaaccagtctccatgagca
cccgaggcgacgctcgcggcgcggcccgagcgctgggcccgggctcgaggtttggaccgg
ggttctacccggcagcaaagccagaggccggacacaccacggcctcctggatctgcgctg
cctgcgcaataagcctggggaggtgccagctccggcaggcattgggcacccgggagtccc
gccgctgtggccgcgcagggcaccggatccctccaggatcccaggctcccgacgtccagc
agaagtgctctggagtgaggcttcattggtcccaggtgagcgtttcgttgccagctcgtt
gcgcgaggtctgaatgcacagtggaaacaacttagggtgggtatgggaaaagaagaaaca
tatttcagaagcactcgccaatataaatttttaaaaataaagatcttaatacagtaattt
gactagagctagcagactgaatgagtatggacaccagaaatatgctttcggctgggggat
gtagctcagtggtagagcgcgcgcttcgcatgtgtgaggtcccgggttcaatccccggca
tctccaaatcagccgacgtttgctttttattttttctcctttcctgttgtatcttagaac
acttaccccattacttgtacatacattttgctcacatctaggccgcccaaaaacaatata
aaaggagggctgaaaaaaatcagcgaagctcagggaaaccaccttcttgactgctcgaag
taaaagtgaaatagggaattggctttcattaatacttctttatttgcatgagtccagtgt
ttaaaggccctgttattgaactttgaggctcctgtgtatgatacccacagaaaaaaacta
gaagtcaaaacttgcattggccgggaatcgaacccgggcctcccgcgtggcaggcgagaa
ttctaccactgaaccaccaatgcttatagcaaatgtgcttttctattgcttactagaaga
cacttacaccctggtaattctctaaacaatcacgtatttgtgtattcaaaaacagagaaa
gcaattaaatttttaatcacatagttataaaaaattagaaaaacattaacatttacaaaa
attttcattatactactttagaactttatgagattcttctgaaactctctttggtgaagg
aggcaaatgaagattttgtcatgtatgcacaggattacacaatcacctagcctatcttca
gacacttagataatttataacaactctccctccaaccccctgccatttttttcttttatt
attttacctattcagacaaatacataatggagatttgttagaaattgggaacagaggcaa
agaaacagggaacagaaatttgaacactgacccaaatttatgatttggaaattggtaaat
tggaactatgtgatttgcatagggaacttgaaatattgatgattcaagccaagtgacctg
aattcTCTAAGCTGCCCCTTCCTTC
Primer
(+)CTGTCCTCTTGGACATTGCG
(+)GAAGGAAGGGGCAGCTTAGA


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