Human element [ hs2574 ]Position: chr16:89,398,798-89,404,255 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: LOC100287036 - LOC101927817 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence AAGTCCCCGAGGACAGAGATgccttacagctccacacgtccctccacaacggcagcacct gtacccgcagctctggggagaaatgacacctgcaggccaagacaaatgcaagaaaacagc ctcgtctgctcactgattctcaccaacttcctctataaaatgaggacaagaacccattct cctaaaggattttgtggggattaaatgaaaaagcactatctaaatccaagttatcatcac tgtaatggctttagaaaaaagcaaacgacaaacacaacgagagaggcgctgagaccaggc agggctctcctccggcagggcctggtctgcactgccctctctgaggaaagtgccccgctg ccctgacctccctagtttcacacctccacacctccaaggaggttatcctggtacaactga gaaagcaagcaattcccttagaaacgtccatttctttcctttatgctcaaatgttttatt actccttagggctgctttgttttttaacgcaagggtccacagttgagaacgtagttacaa actcaagaaacgagctgcaacagaacagcggggctgctccacgcttctcagccattttcc catcctgtgcacccggggaatttcacacgtggtcccccagagtgacagggaacccccagg gaagaagggcccctgtggggcatgcagaaaaacgcctgccccctggtgtgaggtcacaga ctcagtggccaagctcaacaatgctctgggaactccagtcaaagatgcatcacaactttt gggtcatgcctaaggtcaattccagaatcattttagcatgttaaacagacactgaaaata aaacatattttattttttaaagcagctttaggttcacagcaaaattgagcatgaagtaca gagggttcccctgcacccccgggctcagcatccccacgagagtggccgtttgttacagct gagacccccctggacacagcatcatcacccacaggccgcacgacctcagggtccaccggg tgctgtgcagtctatggttggacgaacgtatcctgatgtggacccaccgttgtggtatca tacagagtagtttcactgccccaggtcccccgtgttcctgctgcacaaccctccgtccct ccctctccccagcccctggcgtcactgatctttgtgctgtctgcacagttttgccctttc ctggatgtcagagtcggaaccctacagtgtgtagtccttggagacgggctgctttcactc aggcctggcagctcgtctgtttttagggccttgtaatagtctgtcgtctggatggacctt ggttgactgatccattcaccctctgcaggacatcttggctgcttccaagttttggcaatt atgaataaagccattttgtgaaagtgaaataatacagaacaggaaacattagggggcact gcacaccatcacagaaagggacggtattattctgtgagtatgttcccagtatgtgggcgt gtgttgtgaacagagagataaactactttctcaccactggaagcagtcaggacaattcaa atgctggcctaactggttaagagccctcaatctgtggtcagatatatctaagtttctcaa tctataaaatacagaaataaggccaggtgcagtggctcaagcctgtaaaacaagcacttt ggaaggctgaggtgggtggatcacttaagcccagttcaagaccagcctgggtaacatgat gaaaccctgtgttttaaaaaaaaaaaaaaaaaaaaaaaaaaaaacagagagagagagaaa gaaagaaaaaacactgttcccaagctgcgggctcaggacaatgtctgatgcctggcctag ccctcatcaatggccttcacaatccctgctgactgggagtcaacccccagtgagtgtact gccaatacggccaagtttctgaagttggtgacatgtgagggtaccccaagactgaacaga aacaacctcctctcaggttctgagtgggtccagctcttcttacccctccaagcctgccat tctctgaggagtcctctcttcctccactgctctgcttcctctcacaaagggggagtgtcc caccacgtccaactccaggctggcaaagtgacgagaaaacaccccacccatgtgggcagt gggcatgcggcatgctatggggccatgagaagcagccaggtgggtaggccagaccctgac ccagagcaagcagagcccagcgcagtctcagccacgctccatgaggggccacatccacga gggcccaggagcaacatcccaggcacaccccagggatgagcagcacaggccgccaaccac gtcataccacactcacttgtgcaaaacaccctcaaactgcaaaaagcccacccacgtgtc caccagcagaagagcaaatgagtccaggtggcccacaacacacggggcgcacgtgtccat agacagcacactggattcgaagagccagacacgagtgtgtctgctgtggccttctgcatg catgagggccccatggtgctgggggccaggcagacagtcaagcagcagagtggaggggag gtccaggaggagatcccacaggtacatgtgacatgagctctatcgtatgtgcacctaaga tgtgtgccatttcctccacggatgttataccgcaaagaacaataaaaaacgactaacact gattgctgaccacctccccaaataactaatcaggacacaccctgatgccccatgtccggc ctgtgggggcactgtggaaagcacaggaagtgagctcagtgcgtgccttccccattgtcc tggcgttccatgcaggctgggagacgcgggtgacagcctcacaccacccctgttcccaga agaggccagtgcacccccaagcaggggctgcaacagggctgcacagagggctccagttcc ttccagcacaggaacaaatccacaccgaggcatccgtgagtcccacaggtcccagaagca tgggagcagcttgaggcctctgcattcaggggtctctgccgtcctgagcttcaggatgag tgggttcccacctagcacgcagtacgcagtgggttagggcaggtgctctccctcctctcc ctatgaacgctataccactcccatgaaagcctgtgcgtgctgcctcaggaccctgtagca gaacagcgagtgacgtcgctttggcagggaacctttggtttgcaaagccccgtcacacac acaagctgaggtaagatgacaagtctgtgtctctgcacctcagctgagccctcaggacac agcacatgagcgcccaggggcctgcaaacagcaaggaccaaggcatcactgaccgtgaca ggccccagtgtgtgacagtgagaggccccagtgtgggttctcacaagcttgttttacggt ttgacccagagagtacctgtgagtttcccctacagctggtgcttctaaagggctaggaga aacgcagggcaggatccccacacgccagcagctgactggccagacccctgcctgtgctga ggcatccgccgcaaacatgaccgtgcaacatgcttcaagatgccctgtgactctctcaga tgggtcttttattagagtttctaaataaagaagtgatggccaacatcacaggaaacctta gatactattcctgccagttggtttgaaaaagctttaactgttaatttgctgatcgttttc agccacacggttttctgccatgtaatccacagaacccaggcctctggccacttgtccagg atacctctggagctcagagccactgtccttgtgggctactcaagacttgaggggttcagg caagagccacatcaacagagctggacctggtgcctggctgggagcaggtgccggggagca gccaccaaatgcacacacgccagggcacgcaactgcccgcacctccaagattgtcgtcag acctagaggcgggtgtgcgtccacagacagcacactggattcaaagacccaggaaggaag gagtctgtttgctgtgggcttctgtggtgctagggaccaggtgaacactgaaggaggggc cagacggagtccaggaggactcctgtagcaggacattgcccagatttctcacaatgtcct ctacaattaagagcacaaccactgttccttctgcactggtgggaacccagcacttcaatg agacacaaggttaaagtgacgctttgtaaggacggaaagccacctgtgggcaccacaccc cccgggtgggccacgacagggagcacaggcactaggagacccggcctgtcctaaaagcac gccctacaaggagtccccactctctacctatctgcttctaatgttctgactacatgagag atgataaaagggtttcaatacaagtgtaacattttaaatataaaggaatgtctttccatt agaaaacaactgcaggccgggcgcggtggctcacgcctgtaatcccagcactctgggagg ctgggtgcggtggctcatgcctgtaatcctagcactttaggaggccgagacaggtggatt gcttgagctcaggaggtggagactagcctgggcaacatggtgaaaccctggctctaccaa aaaaaaaaaaaaaaaaaaaaaaaaaaattagccaggtgtggtggtgcacacctgcagtcc cagctatttgggaggctgagatgggaggattgcttgaacctggcaggcacaggctgcagt gagttgagatcacaccactctactccaccctgggcaacagagtgagaccctgtctcaaaa aacaaaaaacaaaaaactgcaaattaaaacgccaaacgcacagattaatggaggaagccc catgcccaaatgctcccaaggaaacgtcagaaaggagaggacttcaggtggctcggaatc ctccgccacgtgaccaagcccagctgagcactgggtctcattggatttgccatcagacac tcacagtttttgtcactgttaaccctactgcacaatacatgaacatggtctaagcaattc tttttttttttttttttttttttttttgagacagtctccctctgtcgcccaggctggagt gcagtggtgcgatctcagctcactacaagctccgcctcccgggttcacgccattctcctg cctcaacctcccgagtagctgggactacaggcgcctgccaccatgcccagataatttttt tgtattttttatagtagagatggggtttcaccgtgttagccaggatggtctcaatctcct gacctcgggatccacccgcctcggcctcccaaagtgctgggattacaggcgtaagccact gtgcccggcctggtctaagcaattctaaccatgcagacaatgtgcaggtctttcctaggt ggaaagcaagtttgcccaagtcgcacgagcaaggctggAGTCAGCAATGCCTGTTCCTPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.