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Human element [ hs257 ]


Position: chr3:158,025,746-158,027,384 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: RSRC1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tAttTCGGCTAAAATTTCTGAGAACCacagacatttttatgttttagctaaaatgcttta
cattttactctgtagttaatgatggtaatatttgttccataatttggattgactgttgtt
tggttgatatgtaaaagaagctggtatgaacataaatttgtaactgttatacacagatta
cctaaatgatcagatgccgaacagtaaataaaattgtaaaaaataaagtctgttattttc
tttggcatcatcataaagaaattgtgcttgtagatgttgtttccaattgcaccagtggtt
tgtacgcaatttcagtaatttgatcgtagctgatgaaaagctgacaagatttccacagtg
ccccattagatgaaagcagcatgaaactacaggttaatctgcaaacagattttcatgctt
attactctaatgattccatcatatttgatgtagcaggctgcaaggcgtctctcggcagca
acagtgtgctacattttgatctctctactcattaaatgatgtagtaatttgactgacctc
tgaccaggtgcatatctgttcataattgcatgtcattctgatggggaaattacttgagag
aaaccaaagtattcatcctgctttctgagtcaaaaaactaacaaaagaaatattgcatta
attttcaaatgatgatattacatttagtgcctaggacccatatatcaaaatctgaaaact
gctcagttactgtatgcgcttaatcttaatggtatctgtggatgtcaagggcatggagga
aattaaatcggaaagtgcagatagacctaagaagacattatctcttgatgattgcagttt
tgataggtatttcagtgaatttcattttcgcagaatggtggaagatgagttagccaccag
attttctcatttttcttctacatgatttatgtgagttgagtataaaactttttatgggag
tgcagttaccgaagatgagaggtaaattaatgcactgggtttccatctcagcttcatgca
caattgtcagagctgtacatatgtaatggtccccatcattattcagggttgtttacattc
aaaatatgtaatgaaatctgttcagaataatgagggaaataaaagtttagaaaattgtaa
aggtcatgaagtttgagaaatgatgcactgctcccaaaataacatttaggcaatataaat
tacattattatgcaccaactctgccttatagagacatgaagataaagtgctttcgactag
taaaatgctgttagcgctctctgaagtatgagaatgtgtaaaatgtttctgatttcatat
tctgttttgtgcatattgtgaaaaaatatatttaagggatcttgatgtggtatctgcttt
tataaacctctaagttttaaacatattttcaagtcctcaaattaattcattctgaaacta
atttttataattattggtctgattttctattttttgaactatgataaaaataattctagc
atttaataaacgtttaataaatgtttttaagtggaatcttagtgatggaaatgacagaag
gccaactagaattcagcataaatttgtttaaatatgtgaaatatttaatgtattctaTTT
GTGCTCTCATACATGGATT
Primer
(+)CACCTCGGCTAAAATTTCTGAGAACC
(+)AATCCATGTATGAGAGCACAAA


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