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Human element [ hs2552 ]


Position: chr2:42,181,312-42,185,462 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: C2orf91 - PKDCC

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGAGTGAATGGGCTGTAGGAagctctgaggatgaagcttgtgaagccacaggctgtggag
tttggggcttcctgggggtagaatttaggaggtccacagtggcttctatcagctgtgctg
aggagagaagagccaggcaaattgcccgctgccagccttctcggggaggaaaggtaggca
gcagcatcggtggggattgcgctaactcaaggtgccagctccatgctgctctggggctgg
ccagcgctctggatgtcattagctgatttgttctgctctgcagaatgtacttttcatatt
taggcagaaaaaaacagctttcgatccttgtgccctttcttctgtgagctgtagcacatg
gcctgctaattatgaattaatcctctaaagagcatgttcattattctaatttaattgtgc
ttcgtttcagaaaataactaaacccagcgtggaataaactccaatgctgatcagttttca
agaagttaacataagacaaaattctgctagagggcagcagcaatttggaatcattaaagg
gaacccatgtaaataataaaaacaaaactaaaatgcagaattaaattaaggaataggaaa
ttaaatttgggaatctaatctaaaattgaggccttatatgcacaggcttaccctggcttg
gctcttcgctcaggagtgctcaggagaggaggttctgcagagtttcccacgaccagggaa
gcggcagtccctcctgggtggcagtttgctgttctgggaagagagatgtgggctgaagtg
ggagaaagggggctttcctcccacggggtcaactgtgatgaagatgaaagccacattgtc
acagatgcatctggatagctcatcctgagccctggtgaccggttcaggagaactgcctgc
agccaagagtccaagctgccactcactaggaggaagcacaggaaatgaggcagatggtgc
tgggtggctgctggcctgagatgctgggagtggtcagccctgggcaaagaagccgcgcca
gccctccttcacctttgggccctgggcacccttccacaggtgacccagctcaggacagag
gctgagggagtttcctcctgcccgggcagtggcccctaagcagggtcctggcctccccac
catcaccgtgagagcccagttacagatggaggagacccggactccagcagcatcatgaca
ggtcaggcctccaccaggcaaaatgagaaagggaggatgggaaggacggggtgtggggag
gaggagagagccaacttataaagtgtctgcaagtcagatgtacagtcaggggcagagtta
gcaccatggctcaggcttcattatgtattgattttttagaccctgtccctggggtattct
ttttctctccatattcctacctcctctggctctcttcctctctctctcccacctccctcc
tcaaaatgaaaagagctcaaccttctgagtcagacagactgatttggagccacagttctt
cctcttacttggtactggagcttcaacaaactattttgccttccttaacctcagtttcct
catatgcaatgctaataatatctgtctccttggtttgttacaagggctaaatgcaagaaa
gcacttggcacagagcaggtactcaggcacttctgcttttttattctctgtttcaccagt
gcttcttcacatgccactctctacacacacatgcacacacgtgcacacatatgcacgcac
aggctccatcctctgccaaaggccttaggctgtgtttctagagcaccacaagtagttaga
aaaaaaatagtccagtcaatcaaatgcaatcaactgcttgctttgattcacaaaggcaaa
cattcaaacagatggccttatcccagtatcaaagtgaagttttccattgccattttcatt
tggagttctacatggataaattagccaccttaaaatagatctcttttttgaaaaaagaag
agaatacaaacaagcaaaaaaagtcttaacttgttctcatttaattcacattttgatcaa
gaaactaatgcacaaaattgaggccacaatactgattggttagttaaacagtgattgcgt
ctaaaactatcaaagatggagaccacaaggacaaaaaaggctaagagttctgtcttgaat
tccctggctactttaccttatcttactttgctaactgcctgcagagagtatgtcagtctc
ttgcctgtcccctgatttatacctgtaaattgaggcactatgaggcacaaccaatctctg
ttctcccagaacaaacccagaaacctcagagcagccacatggtgtggatccaaaatccat
ggaagatccaccttcagtgtcaatggaaaggaagcaggagagccacgccctggcctgagg
ctaccagggagaaggaagggttaccctgaaggtgaggatcagggccaagtaagccacaag
gttggcctacacttaggtccaggggcaaatgctggaaaatgacccctcagcctttaaaaa
ttaaagaaaaaggcatgcaaatttcttagacacataaaactcataacataagacttatcc
agggagcccacctgttgaggagctcagctgatgaggggttaatttctagaagactggagt
aagcgtggtcagttaaacggtattatggactgcacgtttctatcccccgaaattcatatg
ttgaaaccctaattcggaataggatgatattaggaggtggggcgtttgggaggtgattca
gtttaaatgaggtcatgaggatagagctcccatgatggcattaatgaccttacaagaaga
gaaagagactagagtcatgtgaggacacagagaaaagacagccatctgtcttctctccat
gaagaggaccctcaccagataccagatctgctggtgccttcatcttagactttccagctt
ccaaaactgtgagaaacaagtgtttgttgtttaaactacccagtttatggtattctgttg
tagcagcctgaaccgataatgacagatggtttctgtatttctgatcttcaatgaaaaact
ctgtttccagaatatgaaactgcctgcctgggagggcttttgtgtggaggcagttccccc
atcttaccatgaaacctgaagtcatgtctacccaacagaagagctttcaaggtggctaca
cccgagagggaaactaatttgtttccctaaaacaactaaattcccttctatatgaagtcc
atatagtttgagtttgtgcaacccatccacccagggatcctttccctgttggtaactcta
atattattgctgataacactagtgaaaatagtcaacattcatggagagcttactcgatgc
cacacatttgttctaagtacttcataagaattatttcatttaatccttgcaacaaccata
cgaggtagatattattatccccattctatagatgaggcaactgaggcccagagaaacaga
gcagctagcccattataacaacaaaacacagcagcaccggggtttgaatccaggcaatgc
tccagattctggagtctcctaaccactaaacagcactccctgttggtcaccagctccccc
tgtccacaaatctatctacagtgaccctaaatataggccacatggaaaagagagttcacc
aggcctttgggaactcatatctggaaagcagacttgtgtttacaaaataccttcccacag
cttttctcccctggtccttgtggaacatggtggctaggtcttcatggtcatccttgcctt
tcagcaaacgctgtgtcctgggctctgtggggtgtacggtatagagacaagaccatgctt
tattctgtctcatggattagcttctcacagcccataagggcaacacaagcttggcaccca
gcagaacattcctggaggaaacagccttgtcagtgtgcaggtactcatttaaattccaga
ccctggtttttaagacaccgatctgcaatgggcatatgtactgtgatagatgaaaacaga
aatggttttccactgtatctgtattattagatttgacctactatcgaaagagcaaagaaa
gagtggaaaattaaaggtgatttgatattagcctcctattcatattagaaaAAGTGACTG
CTCTTGCGGTT
Primer
(+)TGAGTGAATGGGCTGTAGGA
(+)AACCGCAAGAGCAGTCACTT


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