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Human element [ hs2534 ]


Position: chr1:178,505,089-178,507,211 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TEX35 - C1orf220

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGCAGGAGAGTGGGTAGGTTtgtagtagttcatgatactatcctgtctacttttgtgtat
gttcgagtctccaaagttaataaagctaaaacaaagatatatatagatcaaaaaatatat
atgatgtataacaaagtatttctccagagaaacaaatataaacaaaatggaacagattga
gaatccataattatgtaagaacaagatctttctcatctcagccagtttttccataactag
gttttttggcaatgtgtgtttcacaagctgggactctcaactcctaatccagaaaattaa
gcagaaacttacagattactaaaacccaaggagaaagagttggatgcagaaaaatttatg
gaagattctgggtcagaaatgagcaagtgttcacaccagaaggtcctctactgaaggcat
gagccaggctgcagacgtgctggtgactgaattggatatgaaaatagcatatctgtctgg
catcctccttcctcacagaattggatggcagatccctggttctcaggaccattgaacatt
aaaaccacctgggggctgggcacagtggcgcacacctgtgatcccagcaccttgggaggc
cgaggcgggtggatcgcttcaactcaggagtttgagaccagcctgggcaagatggggaaa
ctccatctctacaaaacaaacaaacaaacaaacaaacaaacaaacatcccacctgaggag
ctctgaaaacatacagatgcccaggcccatcctggaccaattagattgagatctctgcag
gagggaggcctggggtttcagtggtttcaaatgctcctcgggtgattctaacctgcagcc
agagttgagacttgtggtgttaggacaggcaagattgggatttaagctggtgtgcccata
tttaaaaacagctgggtgaacgagctgggaaatggtggcagccatggctgccaactcaat
gacaaattgagttgataggtgagacactgggtgtcacctttaatctgtttgctgtgagtc
acctgaggtcatttggagccactgtgtccaacctgagtcacttctctctgggactctggg
gtgtggctaagatcctagtaggccgaaggttggctgctttggactgagctgtgggcttct
atgctgcaggctttggcaagcgcatatcaagtacaagcgtaaacagctggtcagcagaag
acacagtctggataaagctggggagggaagagttgtggagtgcacgaagattggcctcct
gcttcatgctgggctgtgagtcaacccaaagtaacactcagcagctgaacaggcagtgcc
aagcccagattccatctccacagcaatgagattcctcccccagcatccgtgtctagcgct
gaatagtgtgactttcatccctgccacagcagaaagtcaaactggctaattggcagggaa
cagagagatttaaagcaaacgcgtcaggagccactgatccccgacgactgtggggagggg
agacacgtagtttctaagcaatcgcgacacgttatgggaaactgtgattcaagtttccca
aattctattctcaggtattagctgtggcacagagcaaggcccccttccctgcaacttcct
tgccactcaggtcggtgggagggacagctcgaagctaggatgagtgttgcttaacctttt
gcctgtccaacaggagccaatcacttccaggacatcttgatccagagggaaggcacctgc
ccccaacacggggtttgtggctgagctggccttgcgtcatgcccgcctgctccaggtgtg
acttgcactttgaccttctctttgcctgagccccaccagtttacctgttctgaccactga
ccagctcagcactgctcacagtgccccagcattggggtccctcttgcttggcctctttca
gaaacttcccttctcaggcggccttttcaggtgtggcctgggacctctgcctctctgcct
ctggccccagaggtcccggcctcacttatctgctgccagaaaatgagaaggcaaggctct
gtaaccaatcaatcggccagccggccaaggaaatattgaagactcataaagagctttgag
agaGACGTATTTGGGAAGCGCTA
Primer
(+)GGCAGGAGAGTGGGTAGGTT
(+)TAGCGCTTCCCAAATACGTC


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