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Human element [ hs2532 ]


Position: chr1:212,697,966-212,699,818 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NENF - ATF3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGGCCCATGCCTAGGATAACattagatgatcacatattgaactaaaagtaaatgagtcac
agtggcttacagagggaaagggcatggcatgaaatgtacaggatttagattccagttggg
ctaaacttcttggtgcctcagttattttcatctgtaaaatgagtataattaaacttttat
aaagaaacattattggactcaaccaggataacctctgggaagccagctagcacctgtgac
ctacaactctctatgtgccagtttgttgaatcttagaaataataacttttcatgtgcagg
aatgcttttgactacaaatgatggagaaacctgactggatggctgggataaataggggct
tattttcctcactgtataacatgtttctggagtcagtaagtccagggctggggtagggtg
accaatgtccagatttgcccaggatcattcctgttttagcatcttgggaaacctccacat
aattggtcagcctgggagtaatggtcatcagttcaccaaggtgctttcttctttttccct
tggccagtctgactgtggcttgctccctcatggttgcaaggtgactgttgcaccttcggg
tattacatctgcattccaggtgggaggaagggggatggcaaaaggatccaaggcattctc
ttagagaagtttacctcttattctggaaagaaagtgttcctcaaagacttccacttacag
cttattggccagagctgtctcactagctgcaagagtagttgggaaattaaggctttgttt
ccatgctagtagaagaaggctagggaagaaggctgggagatgcttttgggtggcccctcc
gcagtgcctggcccagcttctcctctttcttacacccagccatggtgtactgagcacctg
ctatgggacaggcactaagctagaatctgcgatggacagaaagacgaataaacgcaaccc
ccagcctgattaagcacacagcctgctgcagaggtgactatgtcagagggcagctgtgag
agggtaggaggtgctgtgctgccaaatctccctgagctgcaagtgtgaatgacaggataa
tattgaacatgatgtactttccaataaaggtgaataccaagatatgaggacaggacttgg
caacgagaaagctccggagagaacagccagctgggtgtgaaaagaaggaatgtgtgtgta
ggggtaagcacctctagcccctgaaaatgaccaggctgggggcctgccatggcattaggg
agccattgtgaatacaacagtgtgagaatggagatctgagtgaccgtggggcacaccagc
atagagccgcaagaactccttgtggagatgagtcaccacccacaaatgaagagtccaaac
ctgcccttgagaaaaagaagaccaaacctttgtctcctgcctgaggatcctgctgggtgc
tcaagcctcacttggcctggtttcctatccttttggcctctgatgctagccccctcctca
cttttcaatctctctctacttccccagctcagttgctaaatccaccgctaggcccaggtc
tggccagcctctgagccaggcaggccagaggcagcagcctcagttgccagccagggttgg
tgcctgatgccagcgacctgcttgggttcctaagtgagcggcagcatgctctgcctcccc
tgcactggtactggccaggtcacagcacagctgtggctctaaccccctcccagcagcctc
agagccatgggagcagacctggaattatcctgcaggtgcttcacgtgaactcacggaaac
agaaaaaaaaaaatcacacaaggtaggagagttACTGTCATGTTGCCCATGAG
Primer
(+)AGGCCCATGCCTAGGATAAC
(+)CTCATGGGCAACATGACAGT


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