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Human element [ hs2525 ]


Position: chr1:94,546,405-94,548,669 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ABCA4(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TAATCCAGCTGCGAAAAACAaaaaacaaaacctactgccatctacttagggactaggaga
atactaggatgagccttaaagaaaatcacagagtggccgggcgcagtggctcatgcctgt
aatcctagcactttgggaggccgaggcgggcggatcacgaggtcaggagatcgagaccat
cctggcgaacatggtgaaaccccgtctctattaaaaatacaaaaaaattagccggacatg
gtggcgggcccctgtactcccagctattcgggaggctgaggcaggagaatggcgtgaacc
tggggggcagagcttacagtgagtagacatcgtgccactgcactccagcctgggcgactg
agcaatactccgtctcaaaacaacaacaacaacaacaacaaatcacagagtgacccctag
agcactgtagtatagcctctcttcttctagtctcctttatttgaattcgttgggaatgtg
tccttgggcaaatgcagaaaatattttactgttaagccagttcttgggttctgttgtccc
accaagatggggatactggggagaaaaagagggaaataaaatgattggggaatgattctg
ttgtagaaaagcaagatcagagcaaatttctttggctaaatagtctaaaatttagtttct
tatatttggaaaataatcttattagcttaattttaccaatgaattcttccatttccttga
aatgtgtggtttgtggttttctcgtgtgtgtgtgcgtgtgtgtgtgcacgcctgtgtgtg
tctgtgtgtgcgttttaaaattctagcaaatacagaacagatgaagtatccattcctgga
aaaacactttttcaattctgtgccagctaagaggaggttggtggccttctcttctccatg
tgggcaccctgtggtgcttgctggcctcatcctttgagggtagatctgtaatgccgagaa
ctcaggagaaggctggtggagctgccagtagcttggctcccataatgccatttggctttg
ctttaggggaaaatacgaaattaaaataatgctgcttttattcctaaaacacacctgatt
acttgctttgctttcagtggtactggggaatttataaaaccattaggattcaatcagtga
gactgaaaatatttccccattgcaataagccatgtttacgtgtcatccctctctttgtcc
acatgccaacacttgccctctgaaactgatgagcccagggagaatccacacagtgagtca
tgcctataatcaccatctatgcttcaataaagtcaaaatctcaaattgcttcaacaacag
tgagtcttatgacatcttgtaaggggttattactattattatgttgctcatttagtcaaa
gcactcagagatgaaggggctgttctcaggtcaaatggtgtaataccaattcatataaac
tgggccttctgctttaacttagttcacaaatgattagacttgctatctagacagtcaaga
agccttctggaacttctactcagaactaagagtgttgatatactttggggattgtttgta
cattctctatcaatttcaaccttattgtagtgatataaatttttttaatgctatgaagaa
aagactgtttaacagagactcccactgtagcaggtgagcattagtacaatgggctcttct
ctaactttcccacatcagtgtgcatactcggcccaggttgagatgcgttttataaagaca
gattccaaccatgcagttttccaggttggtggagcccaagtcagctgcgaataatggagg
gagaaaagtttggaaaaaaacctgtttcaacttttccctccctttcgtaacactcatcac
acttgaagagaattgtttttttcccatctctctttcccacagggtcatgaccaaatctgt
gtgttcatcatcatatccccagcacctcttatctattgcgtggaagaatccatttctata
tgggaggagacttgtgcaatcagatgttaattaaaatgtgcgcatctttttacaaaacaa
cacaaaagtccattgttttctttatgatgaaataagccaacataggtaaaacacttagaa
gaagagtgcctgtaagctataaaggtgtatgctattattattggcagtatatatttatgt
gaattttaagactgtaacagaataatgaaccacctcagtactgaaaagacttagattcaa
ctgtaagtcttctgatgatttatgcCACACCAGGCAAGTTGCTTA
Primer
(+)TAATCCAGCTGCGAAAAACA
(+)TAAGCAACTTGCCTGGTGTG


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