Human element [ hs2513 ]Position: chr18:49,022,569-49,026,479 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: LOC100287225(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TGAATCACACCGGATTCTGAaagatggatttcagacacaaaggaagcatgatcaattcag gagttctgaggaaaattattactatcttactttctgagtgccaagaaagagaatcgtaag taatttttaatatgactagggatttctttagtccatttggagaaaatgttttatcttctc ttttatatcatggtcattttaagatgaagtattagcttttacatttcaatctcatgtcac aaaatccaactttatcactttgattttatatactgtcttcagcacatttgcaatgagaaa ttacagaagaattactgctagggaggagatttcaagacttccaaaagttgatcatgaagg aagtataaaaaaataagcttctgaggtattttttaagagtttgcagagcttttagagctt tgtgtttttctctagagcggggtagatgcagtttggaaaaggtaggtaactggacagagc tctttgatcatattcattccaaggagtccccacttctctgattttcttcaaatactatgc caataagatacatcctgagactttcctctatattatatttacatagtgcctcatttttct ttctagactctaaacttattaagaggaggaagcacatcttatatacaagtgtccatcttt cccagtatctaaccaagaatcctgtacataacagcactggataaataggtggatttgtgg aagttgaacatcatggaaagggtgattccagatttctacacaagaccacagccatagtcc atggtctagatttcacagtctagattttcacttactaactgagtggtttgaccctcagta ttccgatcatctggaaactacgggtgattaacactaccttgcaggaaagattaagataca cacatggtagagtccttacctggcatgaaacaagctccaagttacgaaagactttaaaat accaaccttttacataatatggtgggtctttttgggaagggggttataacttacaatgta ttttctttttctccctgattctcatcaattctatggcagtcatcttatattcattggaga gtttgaggtcttaatttgttctcctttcaaagcaaaatctaagtattctttgtgtcataa aatgttagggttggacagaaaaatttaagttgccttaagtccttcttttaatgcagaaac tgagtctgactttactttggaagggtgcagagaggcctggaccgtcaggcctggaccgta ggattggctaagtgaacaactgggaaatggagattgtgcagattctagcaggagcttgga ggtgatggaggggaagggggacaggaatgagagaaagggaagtgggaatttgctaggtgt tttagagataatgagaagacaagtctgactggtgagctagggtgggaaggtgaagacagc ctgcatgttataaagccaacactgtgccaggagctttacttcatgttcatggcaattcca tcacatccttgattctccattcatttcacagataaggaagcagctcataagagttaacct gtcattggtcacctcaccagtatgttctcccatctatattattctgtgaaggttcagagg ggaacaattcattaatattagatagaaaggttaggttggacaattttgtaaaggcttcga agtcagactgaagagtatgtgctctccttataggcaatgataacactttcaaagttttca gtttgggaggtaggtagggaatgaagtttatgatataataaaagaagtgagttaggaaga atttaacctgacaagtgcaaatccctcagctcatctttgaaatgtcaggtttccactgta gttcctgtcaatcctaatttgtttattaggttataccctttctccaaggggaagggagaa ggtggagtgtgtgaggctccattgaaccacacttgcacttattaaaggcattgtaatgag gtctaagaagttttccttcttgctgcaggcagaacccagagcagagcagggcatgctaat gctttcttagcaacattgaacaatcgggcccaggataccattagcagcattcattctgca tttttcatatctctccctttctaattttatcccctcaagtcatgtactaacttcagggct agaaatgttttagctcaccattaatttctttcctgttgaggaatagaggtaagtcattga cagtattatattattgcttataataagtttaatatgaaatagaattatgtgacaggtctt ggcaactgtctattgccttgaaaattaacacctcacctccaactttgtgttgatatttaa taagtgctttgcttcatcatttgtctttcagcagcactcttagccatcccattgtgcaat gggagcagctgactgcttaattagccacgatgcatcttggcatgggccacctttcctttt cacactgtgagcctgttaagttccagatcccctggcgttgccctctgaactgccaaggtg accctgggaaacattttaagtaggtaaaagttgtagacaacatgcctctctttctagtgc ctttatgctgaccctgggctgcctagcgatgccaaacacaaaggcttcagaaggaattgc caaattctggggactttcttgtctgccttttactctattaaaacctgctgcttctttttc ttttttccattgctgtagggtcttgttctcggctggatgaccatacgagataataagtac aagtcagtccaagaaattttaatctccactaatcagtaggtaagctaatgtattaatctt tccaggtaacacaatgcaggcaccttctctctgtttcttctccttcttatagagaattta tagctttaaggcacctaacagaccattcaagtccaagcacctgaggttctgattcagtaa atctgaggtggggttaggaatctgtacctggaaaaaatcttcagttgaccctcacatgtc accctgagtaagaaatactacactctaaaagagagacgctaacattccacaatgcacaaa atacttacattttgccttgaaagtagaacaaattaaaaccttaagctctccaaaaaatgt aagatgactgccctagaattgatgagaattggggagaaaatgaaaatatattgtaagtta taatccccctccaaaaaaccccatgttaaaaaaaaaaacatatttcttactcagggtgac atgtgagggtcaactgaagatttttccagatacgtacacttaactccaccccagatttac tgaatcagaatatctggtgcttggacttttggagaaacttcctaaactttatgaggaaca tgtccagaaaacgtacagataagattataatccatggtgagaaactagatgtttcccact aagatgaagaatgtggcaaagatgtcccctctcacccctccttttcaacatcatgctgca aatcctagctaatgcaacaagagaagagggaaaaataaaaaagatatacagattgagaag gaaaaaataaaattgtcattgttcacagatgatgtgattgtctctgtagaaaattaaaaa aaaattaataaaaatacatcctggaactaataagcaattgtagcaggatggcaggatact aggttaatatataaaagtcattcaatcactttcttatataccagcaatgaacaattggaa ttcaaaattaaaaacacagtgccatttacattagcagccccccaaatgaaatacttaggt ttaaatgtaacaaaatatgcaaataaaaacctgcttttttattgattaaaagaaaaagaa atattactgtcatgagataatgatttttgaggctctaaagttgcaccatgGAATGCAGTT GCCACTAGTCAPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.