Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2504 ]


Position: chr4:120,655,056-120,657,889 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PDE5A - LOC101927007

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGCGTGATTACCCAACATCCcaatgaggtacagatactactttgtagaggaaagggtgat
ggagaagtgcagatgattttagcggggtagtaaatgatttttaggggaattcaatggact
tgaagagcatacaatgaactgggacaaagtctactgggcccacagagcgggcagtggttt
gtgacaaaatcgtccaggtttgttgacagacttcagtcttattttctgtgatgagctcag
ttaataaaatctccaggaagggaccagaggtaattattttttatttgtcaggtccagact
ttaggcaaataagaaacttcagagaacagatttatcctgtgctttgggagacccagaaga
ttgagagataggaggagtggggaagagtaggtcagagagaccttgagcctcttcttcagt
tcagcatgtcagagtgccatatttcggggtgttggtttcttttttctttctttttttttt
gagacagagtctcagtcgggagtgcagtggcgcgatctcggctcactgcaacctctgcct
cctgggttcaagcggttctcctgtctcagcctcccgagtagctgggattacaaacacaca
cggccacgcccggctaatttttgtatttttagtagagacggggtttccccatgttggcca
ggatgatctcggactcctgatctcaggtgatccatccgccttgacctcccaaagtgctgg
gatgacaggcgtgaggcacggcgcctggtcctgggatattggtttctaaaccccaacacc
atttataacttttcagagttaaagtcaatagagtagaattttagcaaattgaagaaagat
aatagggtcataatgtctacaatcttacaatgatgcttgattcatatttttattaaagag
ccaatttagagaaaaattgtaaataatggtgatgatgtgaatcagagaagaggcaagagt
tcagcaatatggaggcctttcactgcctatcctagaaaacgctgttcttatgtgttacgt
ggagtatagataccagtgcttggggggctggagtctcattctgatgccataaatttgatt
ctgagcttagattatttgtttaaagcagttatctgaagtgagacaacacttacaaataga
taataggactgctgtttaaagtttctgaaaaaccacagagcaagacaatgtattgaaaag
aataaacagtggggatttggaatgatctttctgaatcaataacaagtgacagaaaagaaa
agaattactgattttctagctatttggaatgacacaacactttctgggattcacatttca
tatcagagttgtttaaccagcaaaatgctgaagtgattaaatatgaaaccacacagctga
ggctggagaaaactgtttgttcagaaatgcttctggaatgagactgcagctttagttatt
tttgtttggttggtcagtgatgaaatgtgctatactcagcctgctaaagttatccacaga
ggaaggtttactttggtggttttaaggtatctcctttcagaattttgatgtggcagcaca
tcccttaacagctcatttcctgagggatactaaacaagaggcaaacctaggaaaaaagac
aagtttaagatctctcacctcactgtgaactctttccatgtttaaacatagaagacactc
tcataatctggcttcaactgaacactgccacaaaggccctaactatttattacgcagtga
cccagggcctatttttcaacggaaaaataagagaagatatctttactagctttgtgcctt
gcccaaacatgaaactgaagccaaaatgagtgaaaagactttgttttacctataacaatt
tagttaagagaaaatttttataggtttatgtgcagagtcaacatcttttggttatccact
ggaaatttataactatactaatttatatcactttattaaatatccataaaaatcaggctg
ttagttattgaaaaataaggagctcacagtttgaaagatgataggcatgtggtattttta
attatatctaaacttataagtcaggggaaatggtagatacagtttctagtgtaaagctta
ggttgggattgaaaaggtagcatgattggtcagggcacaccttggggtttaacattttgt
ggtgtctgttgggtgccttggacactggagatcttggaactgtatcctggaattgcatat
ggaatacagtcatcacatatgcttatagagttagcacttcatggcatgccatggatatgc
tattgtcatctgatgttttcgtcttacttcaatggtataatgcaaaatggttaataatgt
aagtttttttcaaatataaaattacttataagacacacatattcttaagaagccatatta
ctaaaccaagcaagctaaatcctcaaaacaggagacgaacagcagaaagggattgcagct
acatggagagactcaccaatgtgtctgaataaagtgaatatatatttttgaaagacatca
tttccaacggtaaaatgaatggaattatttcctgctaagactaatctgctataatttgat
tggtccatattctttaaatgtaatagcaccagttcctgaaattcttaagttattaaagat
acaatattttaaaggttcttttgatcacagttaaattacagatgatttttatttttcttg
gcattttataaaaaagttaaaaaatagctcttaccagtggtgtgctggtaaacgttcact
acccagctttcagggcagggttggggatgtcctgattcaaagtatttgatgatcAACCAG
TATGCAATGCTCCC
Primer
(+)AGCGTGATTACCCAACATCC
(+)GGGAGCATTGCATACTGGTT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.