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Human element [ hs2500 ]


Position: chr15:79,151,012-79,154,383 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ADAMTS7 - MORF4L1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCCACCCTCTGACTTTGTGTtattggctccttatggtgtcattcatcttgttcctctatc
ctttatatttcctgtaaactggaattaatatcaaaaggcctatggacctttagatactaa
ttaatcaaaaacattttttgactagaataaataattatcattgattttgtgttgtatcac
tgctaaagatacactatctatcttgttgaagattagtaaagcactagcaaaactcagatt
aatttctggattaaggtaataacaacctgaacccgccatcattcagtgagattgtcctcc
ttgcatctagtaacctgtgtggtgttacttcgaccctgtaaatatccagttctctaccaa
ctattaacatataaaattaacgtaatggtttaaccataattgacaacccttgtttaaaag
gatttgccactgctggatgcggtggcttactcctgtaatcccagcactttgggaggccga
ggcgggtggatcacctgaggtcaggagtttgaggccagtctggctaacatggcgaaacta
catttctactaaaaatacaaaaattagccaggcgtggtggtgcacgcctgtaatctcagc
tactcaggaggctgagacaggagtgatcatttgaacctggaggtgggggttgcagtgagc
tgatatcgccccattgcactcagcctgagcaacagagcaagactctatgtcaataataat
aataataaatgaatttgccaaagtatgcttttctaatcctgctttttttttttttgagac
aggattacacccttgccaggctggagtgcaatggcacgatctcggctcactacaacctcg
gcctcccacgttcaagcgattctcctgcctcagcctcccaagtagctggggttacaggca
tgcgccaccacgcccgattgtacttttagtagagacgtggtttgcaccatgttggccagg
atggtctcgatctattaacctcgtgatctgcccgtctcggtctcccaaaatgctgggatt
ataggcgtgagccaccgcgcccggcctttgtttttttcttacaaagtagtttccctcatt
aactgggactgtttggctactgtgaaatcacttattctggaaaacagaataaatctttat
ttattatttttttttttagtagggagaggcttggaataatggtcccttcccacactgagg
ttctatcagtctatggaataaattttttcactttttagttttgagtgtgagcaaactcta
cggtattttcaattactcgctgagactgctttagctttctaatctctcgtgtaaacacca
tggtatgtcttagttgaaccaccgtcatgccaaagaaaagaattccgaaaatctctaagt
cacacgatgccgagaggccagccagctctgcagctgggctttcagttccaattgtttcca
gagagtgtgcaggacatttctccgcagccatcttttgcagtgggccacgagggtgctgag
aacctctctggtccccgcgcttcaaggggtgggcgctctgccggcgggaatctttaggat
gaactggaagcacccctacactcactcctattctccgggctggagtcggcatcgccttcc
ttggcccgccttacctttaaggaaacggaaaggtgctgaccactagagggctgtttatac
atttttattaaacaacagaagtttgtgcgcacagaatcagacatgaaacacaagttttaa
aagtcatgaaaaactttaccaaaaaaaaaaaatatatatatatatatatatataaaatag
aaaaatcatttaatacgaaatgtaattcttagaacaaatcaaaacaatcttattcctttg
aaaagatctaggaacaacacttttctctaactgcccggctagctcagtcggtagagcatg
ggactcttaatcccagggtcgtgggttcgagccccacgttgggcgggtttgttttgcttt
cgtttgaccaacttcaggtctcatcaacggtagtaattccaccagtttcagttgtcatca
acggtaataacagacttcagcccggatggtcttattttcaaataattcaatacatacaaa
actaccaatactattttaaaaaaggaacaatgggcctggcacggtggctcacacctgtaa
tcccaacactttgggaggccgaggagggtggatcacgagatcaggagtttgagaccagcc
tggccaatatggtgagaccaccccaccccctgtcccccaccccgtctctactaaaaatac
aaaaattagttgggcgtggtggcgcgtgcctgtagtctcagctgctcgggaggctgaggc
aggagaatcggaggctgtggcaggagaatcgcttgaacccaggaggtggaggttgcagtg
agctgagatccggccattgcactccaacatgggcgacagggcaggactccgtctcaaaaa
aaaaaaaaaaaaaaaaagaacaatgaaaccagtaaatttcatcttgtaaattacacactt
aaaggctatctgccctataaaagtatttgttgctgagtggcctgtttaaagggcagccga
acgccaaaggttaggggataagaagacattaaaattcatgaaattgtagagttcataata
ttgctgaagtaatctgttaaaacgtttgaaatgtttattttttacttaatattatgtgat
attgaagattagtttggagaacaattctgtatatttttaaaccactattaagattgcttt
agtgatgaacgaatatggtggttattgtgaacagggtcttagaacttttttatccttttt
tttttttctgagtgcttctatgtagatacccttttttcttttctttttttttttttcttt
ttttgaaacagagtctcgctttgtcacccaggttggagtgcagtggctcagtcttggctc
actgcaacctccacctcccgggttcaagcgattctcctgcctcaacctcctgagcagctg
ggactacaggcgcacatcaccacacccagctaatttttgtattttagtagagatggggtt
tcaccatgtttgtcaggctggtcttgaactcctaaccttgtcatccacctgtcttggcct
ctcaaagtgctgggattacaggtgtgagccaccacgcctggccagaagctcactttcttt
gagcaaaactattatatgttgacagctgcaagttttttcctcgtcctaaatatttttagt
cattcccagcaattctcaaatgttctccacaattactatatgttagctcatcaattcgaa
atacaatttcagaccttgttagaaagatattaaaaaatttcagcatcagaaaTGAAGATA
CCCAGACACCCC
Primer
(+)CCCACCCTCTGACTTTGTGT
(+)GGGGTGTCTGGGTATCTTCA


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