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Human element [ hs2420 ]


Position: chr10:5,627,988-5,629,809 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: CALML3 - ASB13

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCATCCCAGTTGTCAAGGCCcaattttgtattttactcttgtattatttattttgcaaac
actgcaggtgtgtgacgccagatgctgttctaagagctttgcaaacagtgactcatttca
tccttataacaactccataaaggagacactgttgttatcttcatcctcatttttggaggg
gtaaactgaggcatggtacatgacccataagtaactagggatttagaccaggcagcaaac
tccagagtccatggtcttaacccacagtgctgcctttcactctgccatgcttgcttgcct
tttccatgtagactagaatcttctagaaagcagagatagtgtcttcataaaacatctgtg
aaaggaaaatacattttgggaccctaaaatcgctaatccaaagggaaaagtcaagctggg
aactgcatcaggcaaacctgcctcctattttattcgtaaataagatcactacacagacaa
aaatttacataccttgctcacaatttacccacaaggaaattcctcgtggacaaagaacag
atggaactcaaagtcatccctctgttcatatgagaccagtgtatatgtgatggtttcctc
tgctctattgtctatgtaaaaacgcagattcactgagccagactgaggcatcagtgattg
ttcccctacccctctctcacatgtaaattgtgtattcagtgaaaggctaatttgagttaa
tcagaaactcaaaagaatgcaactgtttgtctcttatctacctataacctgggagccccc
actttgagttgccccacctttctggaccaaaccaatgtacatctcacacatattgattga
tgtctcatgtctccctaaaatgtataaaaccaagctgagtcccaaacaccttgggcacct
gttgtcaggacctcctgaggctgtgtcacgggcatgtccttaaccttggcaaaatgaact
ttcgaaatggattgagacctgtctcagatacttttgggttcacacatcttacagtgagtc
ctgcaggcccctgacaaatgccttgtgatgacgttggcagctgttcgcagcagcagcaat
gactgagaggtgtccttcacctccatctcactaattagacaccacagctctgggaagcag
gggaaaccagccatctctgctggggcagccgcttcctacaacccgcccaagtgccctgca
aatgacaatgacggcagctcctgccctgagaagggcctgggcacgggaggggaacagtct
caggatgcctgttctactaggggagggggcgcagcttcccagaggctcatggcctgactt
ctgaccttcctgaaacctgcaccaccgcccccttccagcttccctgactgcaaaacagca
tcttctcttgcattgttctttgaggaaatttggcagcaggcatggaaaatgtttcctcca
ggcccccagctcagcacatgaaaggcaggctgctgtctgcggggcccccagacgccactg
gattcccggccagaacttgcagctcagggagtggccctgtctcttttgttatgacccctc
ctcgagatgccaagctggcgggggaacaacagctggcactggccgggctggctctgagtt
cccctctcacagctcacctagcctgagcccctgggaccaggtggggctgctccaggacca
ggagcacctccgggggctgcagccatgtcctcgggaatgtcagaggcctgatgctggcag
gggcttcactcacacgccacgcatggcaggaggggcgagcgctccccaggcctggctgtt
gtTTATTCCCCTCCTTGCCCCT
Primer
(+)TCATCCCAGTTGTCAAGGCC
(+)AGGGGCAAGGAGGGGAATAA


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