Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2418 ]


Position: chr1:92,310,736-92,312,231 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TGFBR3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTTTCGGCACAGTCCTCTGAaatttttcattagaattcttttcttctgaatcatgttaat
aaagtaagatttggtctgggatttgtacataagtacttactcacatgttgctcaagccca
aaaggacaagaaaaagacgctgaggcctgtcaacaggaggcagggccaggctcaggaact
ggaagattactggatggatgttttcaaacagagctacacacagctcccttatataacact
caattggcttttagataagtctgaaatatccttctatactttgatcttcagctgtctccg
ttgccttcagagtcaacagaaactggcacttggctccaaaagcctcaaatctctctcatc
tataagggacagggacttctattatttgtctacaatttgtcaagctgagttaattatagg
tgttatcattctatatgtcaaatgtagcaaaataatgcaaacctgtttacctgtttcttc
ctttcctgcatgtagtataccctgaccttaaattggcatgcacttgatttcaaatgaaga
tttttttaaacagcatcttccaactgcagtagcagttggaaaattcactttttgctgacc
tgggccacctaaacagaggacatgaggaacctgacttgttttattttaagaagaaaaaac
tatttaaagccctgatcctggctcctttgaacatttaacacttaaaacctgaattgttac
actacaaactagagttccttttcctctatttaagaagaggcccttgcgaagaatttattt
agttaatgaaagttaaacaattgtgtttctctcacaaaacaaaaataaacaaaacctctt
gaagatggtctctgggctctctaggtctgcaagtgtccatatgagctccctcacggagag
cctagagcagtacactggcagtttagaaaacaatatagccacaagcacttctccaaaaag
aaaagcaactcccctcttggcccaattccaaaacgcaattgagccgggtaaggtccaagc
taatctctgtaccgtctctctgccaactttctcctgcaggcattaggtttttcagcatgg
gctttgcaaataatctaacaattaattagtgcttttgaattcaccccataccattaatgg
aacactgccagacagcctttgatagggtatttctagagctaattaagcttggcaaaacag
aggacacaaacttcctggcactcacaagggccaggctgagacctggcaggtgacagacag
taaagttgtccttacagataatcctggggtgatgaaaatggcaggctgcttggatcaggc
tctcggagtcctctataatatgccagaccctactctcaaattatataactatcaggcttt
tcgcatttgagctattctttcaccctgaagacattttttttcttctgagtgaagatttga
tacttaaaagtttggtattgcttctagtccacacccCATCCTGTCACCCCCGAAAA
Primer
(+)GTTTCGGCACAGTCCTCTGA
(+)TTTTCGGGGGTGACAGGATG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.