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Human element [ hs2404 ]


Position: chr1:203,660,971-203,662,806 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ATP2B4(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTCCCCAAATCCAGGGTTGTtggggttttttaaaattaattttaactttttttttttgag
atggagtctggctctgttgcccaggctggagtgcagtggcgcaatctcagctcactgcaa
gctccgcctcccgtgttcacaccattctcctgcctcagcctcccgagtagctgggactac
aggcgcccgccaccacacccagctaatttttgtatttttagtagagacggggtttcactg
tgttagccaggatggtctcgatctcctgacctcatgatccgcccgcctcggcctcccaaa
gtgctgggattgcaggcgtgagccaccacacccggccttttttttctttttttgagacag
ggtcttgctctgttgcccaggctggaatgtagtggcaaaatcacggcttactgtagcctc
aacctcctgggctgaggccatcctcctgcctcaacctcctgagtagctgggaccacaggc
acacgccatcatgtccagctaattttttttattatttgtagagacagaatctttccgtat
tgccccggctggtctcgaactcctgagctcaagctatcctcccaccttggcctcccaaaa
ttctgggattacaggcatgagccaccaaacaaaacccaaatccttttaaggaaggactta
aaaggtattctgctgtctgtccttctcaagttccaaaagaggacagccttcaaatcaacc
cagagaaaattctccctggtactatatgagtgggagaagattctgctgcctcctttggca
aggtgtcataactcagacagctgggaagtccctcctgatgtctaccctagccccaccctt
tctggggctgagctggttctgataagtagtgcctctgccgatgtcgttggcccttccctg
ctggagctaagccactgagggttgggctgcatttctcctcccaggccctaggtcctgcac
actcatggcagacacaaatattccactgctgtttattctatgttcccacccagcctgggc
aggggccgtgcacctccccagcatggggtgggggtgatgacttcacagctaaacattctc
tttgcctctcccagctcatgtgttcagtctggttcatagggccagaagtactcccactct
gggtggggctttctctctcatgttcttgaggacaagatttcccctcagtttcctgaggaa
tttctaggggaaacccttttcctgtgtttccagcattctctccctgccaagttttccttc
ccctctccaggaggttgtgtgagcatctgagaaaccactgcagagatcagggccttttag
agccttttcccaggctggacaagtatttgtgtgaaattacagctgctgagatcagggcct
gaaagactctctagggcagaaagaattggaatggaaagcccaaaactggggattggccga
gctcccagtcccacatggctttcccatgcctcaccacatgtcagagaggattcccaaggc
tactacagctaagagccttgacctgccccgccttgctgcagggcatactgggaactgaga
cagccacttgacttcttaaggttgctattgtacaagctcagggtgacttaaggtggaaca
catagatgagtagaaaatggcaaaaaaaagaagcaagcaagtgactttgagagcatttag
gtaagaacaagccctgactttttatgttttccatagtgtatgtcacttcatttgcttggg
tccaaaaaaggccataagaaaggttttattgagtacaaaattcataggtttggactctga
tgaacctgatggcgatGTTACCATCCCTGAGGCCAG
Primer
(+)GTCCCCAAATCCAGGGTTGT
(+)CTGGCCTCAGGGATGGTAAC


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