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Human element [ hs2399 ]


Position: chr6:43,760,764-43,762,277 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: VEGFA - LOC100132354

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACCTGAAATGGTCTGGCTGGattttataaccatttttgcaagcatgcatccttactctcc
tgctgaggagtgaggcacgccagggcaggttcagccctggagcccagcagtgagagaaag
ggattggactgaagggaaaagagggtgtggagagcccttcctggtagggatgatgccctg
tggctttgaacccaggaccaggtacaaggtgggcttgcatgagtatttgtagaattaatg
aacaaatgaacaggagcagaatgcatggccaatcttctcttaggtcccccaaacacactg
ggaacctccagtctgatggaggaggccggatgtccacccttatacacacagctgtgctct
gggcaagaaatgctgaggctgggcagggctgcttgggccaggctgcagtggacggatgcc
cccagggctgtcttcagaagctccctcaaggtggaaacctgtctgttccaggatgtttag
gtgaaatgatttgtggtataggtatggaagggcctctgggacccaggcaggggagaagcc
cttccctgggactttggagagctgggagctgccatctcctggggaggccacaagaggatg
tcttctggggaaatattcagggagggtgtttgcttttggctcccaaaggcatctccaccc
ccaccccaggtctcccctacttcactccccagggttccctcccagctgctctcctggcca
gcctgagatagagagaggatggcagggcttgctgggcccctgaggctgggactggtgggg
aaggtctggccccagcagatgccctcctgaggcgtcctcgcttctggagcgagactccta
ctatagatcttctttcacacgggtacatccacacgggctcgcacacacacaagtgtgaca
ggggtcactattgccagtcacggggcagccgcctggttgggtaagggttcctaggggctg
ggtgaggcccagctgggggagccagcatctcgggacgagcccccatggggctgggggttg
ggggctgacctggctgcggtcccatgacccagagctgccctctgggaactgctgactgtt
cagcaataaacacctcatggctattaatagtcttctgtgtggcagcccagaattgataac
actgggtcacttctggcctggcccagcctgactgcctgggttcaaatcctggctgcaatt
tctgagccccgaggtccaaaacccaaaccccaaacacagccccagctccgacagcttctc
agctatgtttaggacaattacctttctgcatctcacttgccatctctgaaacaggcacca
tgatatctatttcacagtgtttcgtgtacatatgatcatgtcatcctccccacaccagac
attggcagtagtgtccccatactagagctgagagtgctggtgctcagggaaatgcagatg
gttataggaggatgactggcatgcaataagggcccgataaaggttagctattgtCGTCGT
GATTTGGCACAAGG
Primer
(+)ACCTGAAATGGTCTGGCTGG
(+)CCTTGTGCCAAATCACGACG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.