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Human element [ hs2394 ]


Position: chr6:108,909,808-108,911,282 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: FOXO3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTCCCCAAAAGGCAGAGGTTaagaagaaagttaaaatatcaagacacactaaactgtttt
tgtggtgagtcaagctgcagtgcctcgctgactgggaaacaatgggctgggcctcctaga
atatagtaggctggagaaacagaaaatacagcttgactgggccttgccctctcactccaa
gcctcaacaggatgctagagctttagcatgctttctgctgtgctgggattattttctgca
actagacaaaaaacccacaaaactccacatggtttgttctcaagcaactggaatatggaa
aggcttgaaggaatacttacactttttgatggaaggtaatgaccttagttcttcagtatt
tattaggtaagcatgggttctgcagtatagcatttaaaaattcatgttcctcagggtttc
ctaagacaaaatagagtgtgtttggtccagtgtgatggagaagtttgatgcaaatccgtc
ttaaggaggagaatggaggctgtcatggagtcctgtggactgtttcgcaagtagttgttt
tccatgttccagttttacttaacttcagaaaattattgtttttgaaaataaagaaaaaat
ctaagtggtagagagaaatataggctgtatttaaactggcctttataatttttcctgggc
acacgcagcccacattttggagctctgtgacataagcaccccctgccccggagctgggag
tcttgaccgggccaggccttggctgccctgggctacacagacacaagcacaacccgaatc
tttgtttacttcctctccaagtgctggggacattcagtactaagaaggactgtgtgcttg
cacaaacactcctgccagcattctctcagccctgccattcctgactgtcttggaaagttc
ttcgtttaaggcaggcttttgttcttagagtgcatgcattattccccagtcaggcagcct
tttccgggtttccagtgcagacttgcaggtccactcccctgcagcctagcccaggggtgg
aaccttagctttagttgccattaagagcaggaggaggagttaggcaggggtgactggctg
ttcatgtgagttcctgtgactgatgtctctgaagaaaccaatgccttcttcagatcctta
tgggaaatttaggggacttttggattacacagtgttgccttttgctgattctaagataga
gccttccaattgtaagtatgttaaaaacacacaactatttcctactgaatgttagtcaag
ctaaagagtgaatctgcaatttcatgaataatcaaaacaaaagcatgctgccaggatgaa
ctgttgcaagagcaggtgctatttttttccagaaacttttttatcctcgatcacgttatg
ggtattaagagagttattcttaaaggatatcatgttcagtgcaatgtcttaatagaaaaa
ccttaaacataagtaTGCAGGCAAACACAGGTACA
Primer
(+)CTCCCCAAAAGGCAGAGGTT
(+)TGTACCTGTGTTTGCCTGCA


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