Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2393 ]


Position: chr20:17,839,843-17,841,338 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: BANF2 - SNX5

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TACCCCTCCAGGATCAAGGGgtagggcagtcgggttgcagctggggaggagatgaaggca
ggaagtatgctaggtcagtgacccaggcaaatatttggcagatcaatgctcaaggttgac
ctcaagtgtttaccactgggtcaccaggaagtggcttcttgccactttcacccacgcctc
ccctcatggcagccttcagggatgagggcttttctggctgtggtcaggggctcacctgtc
cacctagccccctggcctagagcgccctgccttgcccacctaactggaggtggtcttggg
acacatcattttttcctcagagtgagtggtcgtcagaggccagatcccaccaggacagcc
tcctgccctgtgctgagtcctctcctagggaaaggccagcccactcgctctcccctaaac
aaccgggagcacaggtaactcgcctctctccaaccgatgaggacgtcccgcgcccaggct
cctgagggagggcgtgggaggaaggtgcgagccagacccacatcctctctgctgctggag
ggggcccttgcaccggctcagaaaggtgcggagcgttgcctgcagccgagagggaaacag
cgcctctccgagcactttgttccacttgctggagggctaaaaatacactggcacagccaa
aggcagtccttgagagcccaggggagttggcagtggggaatagctatcctagcacctggc
actattaaaggagcatcgcaggattagccaaccccctgggccctgcctgcgcccgtcatc
cccactctgcactcagttcactcttcctgcagcagagtccgggcttccctgcacccctgc
tccaccctgcccactctttccccaggctggaccatctgtatccctggttggagcctgggg
ctgcctacgtgactgcgcttttgcagatgtcaaaacagcagctctcctgcaaaacgccga
gaatgcttccaattcctccagggaagctacaatttgccataaagctgaaaatgaaaatcc
ttttagtgggccacaacccagtttgtgaatttcttaaattcaagaaatgtgcattgacac
cctgcttctataggccttaatctttccaggacctcaagcctctgtgagagtctgaagaaa
gacagggactcagaaaaacaaaatgctcctaagcagcaattgccaagcaattttagggaa
ctggattttagggaaatggataccatgaaccccatccacacatgctcacactccgagttc
agaatgcttgatttgctggaagccaggcactgagctagaccctgagatggagagatgagg
aagtgggggaactgccgggcacgcaaatgccaccaatgccacgggcatggttaaagagag
gtgagaaccaggccctcagggttgcgggggcggggcaggggggaagatgaaccagggtgt
aactagaatatggagaaaagggtgcatttgaatgggGCTTTGAAGGACAAACGCGA
Primer
(+)TACCCCTCCAGGATCAAGGG
(+)TCGCGTTTGTCCTTCAAAGC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.