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Human element [ hs2377 ]


Position: chr6:163,630,391-163,631,925 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101929239 - PACRG-AS1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGGATTTGGATGGGCAAGGTtgaaagtagttgtaagttgatctggcattttatatttcat
taatcaatttctaaatctataattaaaagaaaactacattgagtggttgggcataaagta
gagattgaatgatacccacaacaaataattgttaatattgacaggttatgctacagggat
tgcctaatttcacagatgagggtaacacaaaatgagacaactgctacataatgtttattc
taaaggaatattatgacattactgagttttgaattttcctttgtattgactttttcataa
tgcatgaaataagcatacatcaacctagttaatacctgaacaagacaacatatccaagcc
ataatttgatgtaaagcatgtgacacaaaggaaatatcatattgtaaatatcgtactgta
aactaacaactgaaaacttccatatgtctaaagtacacaaacatattctttattttacct
tcacattctttcttttaaagaaagaaaagccattgcaactcagcagtgaacaaggcaaag
acagtcaattgaaatcaaccctccattgcacagtaagagtatatgtgtgaagttcttgag
ccgagcccctaaaagtctccatgaacatcaaaccacgcctgttgggggacctcagttctc
taccaaatgtcttgttaattgagctttggcaaatgtctccatgaggaccattgtcacccg
tcatgctcatgagagtcacggcctacgcttccacatacttttaaaaatcttattaaagat
tacagagcagtcaggtgagtacacagacaattacatccagacgatgaacagaaggacaga
ataatgtactaactttctgctctttaatggactttacctgtgacccaaatatattccttc
taaagcatttatagaactatcaaagtttagatattgtaataccaatgtgtaatccattct
ataatgcagaatatctttctaaaatgtgaaaaagtgccaagtattcaattcaacacagta
agtgttgaacatgaggacaaagaaaattcactggagggccttcattaaaaaatatcccca
ctgaaaataaagcagagaccaccagagtggacagagcactcaccatggccttagaaggtg
gagcttccaagcggatgcacccatttctatgggctgaggaccataacctctgagcattaa
cttcctcttccaaagcacatggatgatatctactgcagaggcatgttgaagggattaaat
tggttaacgcatactgaagcagccactaaatttctctgttaaatacatgtatctcttccc
cttacttttgctgagaacaaaataatttctgttctttgttgcacccagtttgtactgaag
ggcataaccttgaatatttgaaaaggaaaactctcttcagttcaatggaagatataggac
atgttaagtaagaaacagcaagctctttaaatcagtgaatagctgtattggggggaaaaa
tgtggttcatcccaaGGCAGCCAAAAGTTGACCTG
Primer
(+)TGGATTTGGATGGGCAAGGT
(+)CAGGTCAACTTTTGGCTGCC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.