Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2372 ]


Position: chr2:109,252,387-109,254,056 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LIMS1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTCCTCACATAGGCTGCCTCtgtcggcctgggtccaaccaggagagaaaacccacacgct
aatttgaacaggaaaggtttaatataaagatagaattactaactctaacaaggttttgga
gtaataaggaattggctagtaagaggagagaaagcaaaagagtataggaatagccgctgt
aaggagcagccacggaccctagagctgagttagagtgccaagggaggagccctactccgt
gcccggggtcacactaccagggcatgctgcatgcagaaaagtcgctggcacagattgctg
gaaatcctcctttccaataccagagaaggctgttcccagtgagttccctcacccaaggta
ccccctacatagctgactgccaagggatgggtgctgctggctgcatgcaccatcagggtc
caaggcactctgctgtaaaacttttgaggggccagtgccactgaagctggtgctagccac
catgccctgcaggagctagacaccgaagaagccagagtgctgcaggagctttgcccaggg
agcaggcaggactgggaagcaaacctcttcctcctgcagtgtctctccagcaccctctac
tgacaaggtctcagtgctgctcatagaggacaaagattcacagaggtagcagtaactgca
tcaccagcacctagcaatatcccagtgatgcctcctacaggacacaagggggtctgtcta
agtgggtaattgccatatttttatatattattgctagatgtatagaataccactttttga
gaagaggtaaggaatggaataaagagcttcctacttagccctgtgaactgctttcaaaaa
ccatagcttcattccgtgacagagaatggagagctctgtgtggggagagaggaaggttga
gcacaggagcctgcagaacaagaggagtgactgaggcccctgggagatgctgctagcctg
gttgtagctgggcagtgttacatgagcaccagcttacagtggttgacctcctgaccttat
actatttccacatcttttttcattgtacttatggcaaaatctaagttatggtagctgaaa
taatcccttgcctttctgtgtacatttcacaaaatttaaagttaatgaaagaaaagaaac
ctttttaaattcagcaaaatatacatatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtattttagttcctctgcttcatcctggtcagtattttcaaatgct
gtttaatgcagtaaaatctacacaaaacatgttctgtgtcaaaaagaaaataacgggcag
tgaaagatatgtacatttgaatttgaaaaggttcattgttttcacttgactcaagtgaaa
tgttttttattctgttctattctgaaattctcatggttttcttttaccttatcattgagg
gaagtaaaccccgtgttaagcttagtcacaaaataaaaactcccacggacttccctccca
gtgtagctgaaggttaatgtccagggagatagccttgactgagtcagaactaaaataagg
gtgttatttagagccagatactctggtgctacagccactacagccgtgtcaagagctcct
gacacactggaggctgtcactggtgatctgGGCGTTCTCCTAAGTCAGCA
Primer
(+)GTCCTCACATAGGCTGCCTC
(+)TGCTGACTTAGGAGAACGCC


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.