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Human element [ hs2371 ]


Position: chr17:55,618,678-55,620,173 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101927557 - LOC101927539

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GAGTGGCGTTTCTAGCTGGTtcattcaacttggcaattcagggaaataatccagaaaaag
aacgaaaggaagaaaaggaaggaattcaggagagctcatgtgtatgacaacatgcaccct
ggcatccctatatacctgcctcctttctatcctgaaaaaaaataagaaaacagcaagaca
acactgaacttcaaaagctgccaaacagacttctttatttctttatgttgtcccagaagc
tctttcaggcaggaacatttgccaattcaatcctggagtgaatttttaagctaaattaat
gcagttgggggtcaaaatggcaacacctacaggtcttcagttgtaaggacaccggtgggc
acagcagtaattgatcattatagcactcatgtggatgtgcttctcttaatcccctggttt
ggttggcaaaccaagtagtgtataaaaatcactgccatgattttaaagtgatcaaagttg
tacacctttgagcactccttacgcatttgaaatttctccctcaacttgccacccatcttg
gtatcaggaaataactgaaagtgccttcttccccctgaatgtgtccagcgttggtgcctg
cgttctagcaccctaggcaaagctggcgcctctgcaccagatctgcaatgtgcgtacgca
atgctgacatccgatttattatctcggagggctgggctggttcatggatgattcatgact
ctgctttccactgccgctggaggtgacatcatctattcgggacccagaatagacacagga
gcaacagtgggccgtgttttgtgtgtctctcaccagccctgggctccctcccacttgcca
ccccgctgctgggtgttcattgagtgagaatggtggtgacccaaggagtccgtcggaaat
gtcttcttagtggaaggtcataaatgtgtttcaacactgttgcacaataaagcagagaag
ggacctttcccaaagttcatctcttcccttacgttcttctagttggaatttagatttcac
tggcaacccaagagctgcttcactctgtggccgactttgattttctcatgtagagacagg
gttggttaggaaagtctggctgagataatttatcccacagccttagcattggtcaccctg
catgatgactgattaatgtcatgttagatgttggaattggatcgatggtttccaacctgg
ttgtacactaaaatcccctggggagtttttaagatgtcctgatgcctgagtcccacccca
gaccaattaagtgagactgaaagatggagccctggcattggttatttttaacatttttcc
agctgatgctaatatgcagtcagggctgggcaccccctgggtcacatgaccttcaaggag
ccttccagctttcaaaccctttaaaaaggcagcactgctgacttggaccaggtctttgag
cctggtctgtgtctgggcagtctggcacgtgtcctgCTGTTAAGCCCTGGGAGGTG
Primer
(+)GAGTGGCGTTTCTAGCTGGT
(+)CACCTCCCAGGGCTTAACAG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.