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Human element [ hs2349 ]


Position: chr22:47,048,605-47,050,100 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: GRAMD4(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGCAGCTGCAGATTTTCGGtgcctggacaggggccggggctggacgagaggaatctgcc
gtgtgaatagcagctcagtagtttgctccgggctggaaatcggccctcctgtttcttttc
ttactcgggaaagagaaagaaaaattgatgatgggggatttgcatctcctttgtcctgtg
gaaagatacagctgtgctcggcacactgcagttgacctgaatgtgtcgctggtgggcagg
aggcaggccggtgcgatggagtcgtggggcgtgtgatcatcatttcagtttcgggagaga
cagcagcttggccttgcagggagccgtgtgctcagagataggaaggactcatgggagagc
agcggtcagacgctccagctggtttcgtttacttagctgtctttgtaccatcaggaacga
cactgggcaaaggtgggaagcctcatggctcttccggaagctgggacaggctgatttgcc
acgctgtccgaggagccctgtctgcaaggctgagggggccgtgccgcccgctgccccggg
agccaggcatcctttgggctctgagcagcgagcatggcggggctctggcgttcacatggc
gtcctctgggctctgagcagtgaagatggccgggctctggcgttcacatttgtcagggct
ctgcagagagcctgaccccaggaggtccagggtggaaagaggggcggctgcctgagaccc
ctttgacctctgaacccaggcttgtgagtgtgctttttcacacaggcaggcatgacatgg
catcccaggctccaggagggacccgtgtccgcatccatccacatctgtccctgggctggg
actggccaccttggctcaagctttggccagtgctctgccgcgtggtggaacctggctggc
tgctgccctttcacagcttagtgactccaggaaggggcgtagggggcagccccatttagg
aaaatgtggtttcctgttacccgtgcagggaggggccaaagtgcctctctgacctatgga
tggagaggcatgtgggctgccttgaccttgacagggccaagatcagaggaggtgatgtgt
gggtactaggagttaacctgggaaagtacctgagccttcccgccttggcctactccgccc
aagaggcctgccgggagcaagcctgcccagtgtgacttgtctcacctctgtgttcccacg
tgatagagtcactgccacaacatgaagacagaggcatgagatggaaacaccccgtggctc
tctctgaaccctccccagctggctccgaatttgggactgagccaggcggacgctcccttt
ggggagaaacaccggctgacggggcatttggttccttccttcgcttatccagtgagcctt
gattaagccccttctgtatgccagccacaccgaaagaggggccaggaggctgagaatcgg
gtctgttggaggtggctggggggtagggtgggagggCAGCATCCATCTCAGGTGGG
Primer
(+)CAGCAGCTGCAGATTTTCGG
(+)CCCACCTGAGATGGATGCTG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.