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Human element [ hs2344 ]


Position: chr5:88,184,058-88,185,811 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MEF2C-AS1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGGCTTTCCATGACTTTGTGcacacaaatgaacctttccttggcttcagactgaggctag
tcccagaaagagaaccagccttgagacacatcagaccaggatggtcaatatctcttttcc
catttgtaatagcaggaggactttgcatagtgaagaatcatttataaagcctctatattt
gggttgacatctctgaggtttatttttaagttgcttcagagtcaaagagaaatgaaaaat
tttggccagttttactttatgggtgttagttgagtttaggtttttaggcttaggcccaca
gtgagtgagtccaaacttggtcttgtagtcactaccaagtgatttggtgagttctctttc
ttccagttgtgcttcattttacagtctattaagtgagaatcataatacacatctcccagg
gcctattcaccttatagaaatgcaatcttcatgaaataacatctgaaaggtatggtaagg
ttttttttttttttttaaacgacactacaaattatgatacatttctttcttttcctgtaa
tcagtatgtccaaataaggcttgatcagtaatttgcttgcaagtgtgtggctgattcaaa
aataaccacatgcatgaataaatttaatgcgactttacctttacttacaaaattgttaaa
tgttgttcatcagaacattgattctatcccatttcttgaaatatcacagaaaccttcaat
tcaaggaatggattttcacacttccccttttaactgtttcttctagataccttactatgt
gtgtgctttttcattttaaaaaatctttacccggggttgtggtggaagtggggattaaaa
atctcgtcctgcgttttggtgcccacttctttgtttggaaagcagagcgctgggactcaa
tccggacggccctcaaagacccagacgagggacgcctctagtttgagcaactcactccgc
tgagttattgattgcaggcagcaacaatccctccggttgatttgtgtgaaaagtgaatcc
gctctggctgggcgttcagcagaggcgcaacagctgcaacgccatccaattattgccgat
cctcccctccaacactgctctcatcacctatatactcttctctctgcccgtctctgcttc
cccccccttccccccccccttttctcccggccgacggagctgaaggggcgggggttcctt
ccttggagtgtttctagagctcggaggctgctggtagggggtgagtgcgccacgtgcgtg
cgccacgggcgagcaggaggcaggctctgggccctcctggggacctgctggacctgctgg
acctgggtgcgacgagtgggcggccacgctggtttggcgcggggaaggaagggggtgtgc
cgacttgtatttagttgggggttgtggaagtcacggctgggggaaaagcgtccggtggtt
tgttggtaaagagggtgcgtgatgggctctggggaatggaggagggcgcaacggctgtgg
gtggactgtggaaacgggcggtggcagtgccggggtagttgtcctgctggtctggttttg
ggatcctgggctggagaaatgcgatccaaaagagctcgggatgggctcagagcgacccac
gaaaataccaggggccaagtaaaatgaacccaccctttaacagtgcacaaagcgctggca
cacggtccacgtctggtgacgcaggctgcccgaagcgctccaaccattttgCAAACCTGG
GAGAGCAAGAGGgG
Primer
(+)TGGCTTTCCATGACTTTGTG 
(+)cacCTCTTGCTCTCCCAGGTTTG


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