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Human element [ hs2341 ]


Position: chr1:151,474,074-151,475,374 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: POGZ - CGN

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CcCCAGTTGCTCTGGCAATACAgacatttgaccttcactcagcaaccattatcatttcct
ccatgctcctaggagccactaggggcaggtccttaccaggaagttaaattcctttttatt
tttattttttttgagacggagtttcattctcgttgctcaggttggactgcaatggcacga
tcttggctcaccgcaacctccgcctcccgggttcaagcaattctcctgcctcagcctcct
gagtagctgggattacaggcatgcgccaccacacctggctaattttgtacttttagtaga
gacggggtttctccatgtgagtcaggctggtctcgaactcccgacctcaggtggtccgcc
cacctcggcctcccaaagtgctaggattacaggtgtgagccacggtgcccggccaggaag
ttatattctatcccaagaaagtggtccccaagttaaaaaacttgcccttaatccactttt
atatttcatccccttgattaagcactgtcaaaatccaatcccatgggtacttccctactc
ttaccactaaacgttggccagttcttgcaggatactttgggttatagtccctttctttcc
ttattaggcctagtatgtccttagctaccagactatgctgtaatttaacccatgagagtt
taagattaagatcttcacagtcaggagatcatgggaggggagaggcctctgcagtgtctt
aaggctctgagggttcagaggagtgcagaaagccagaatctttggggggacctgcccaga
tatttctattccacgtattagggtcccaggttttcccaagcagagtcctgaccttgattg
cagatctgcctctgggagctctattgaagtcctcgagtttggtcttcagatttttttgct
ctctcactgctatagataagggcctctttgtaagccatcagaaaggccctctgaccttca
cagttaatttccaacgtttgttaactactctcagcttttcattttctcctggcagggccc
agtgcaacttaataacagccagccaattccattgtccctatactcactgctgtccctccg
cctaccccctatgcctgaactgttccaccacaggagcattctctcatttcacatcagtga
aaatttagcaacttggctaccatcttgttccagagactacctgtaccccacaacatccag
gaggggttcttgttgccagccaggcagtgagtactgcagttccctaaacctatcttactg
ctcgctttttcagaccacttcTGGAGTGGTCACCTGAGTCA
Primer
(+)caccagttgctctggcaataca 
(+)tgactcaGGTGACCACTcca


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