Human element [ hs2319 ]

Position: chr6:100,904,128-100,905,067 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: SIM1(intragenic)

Timepoints:
e11.5

This enhancer was generated by the Ahituv lab at UCSF (http://bts.ucsf.edu/ahituv). For further info contact: nadav.ahituv@ucsf.edu This element was tested @ E12.5

Expression Pattern

eye (3 out of 7 embryos)

forebrain (4 out of 7 embryos)

midbrain (mesencephalon) (4 out of 7 embryos)

neural tube (4 out of 7 embryos)

Embryo 7

Embryo 13

Fasta sequence

CTTCCTCCTCTTCCTGTCAGAGTgagggcggtgatgatgtcgggtctgtaatatatattt
tgtcaagggtattaaattcattccgaaggaaaagctctatcaatttatttttgctgcctg
caataacacagctggatgatgctttgagctcacactagactggggctcatcattcattcg
ccaagaacgggcctaaatggtgcctgtgggattaggtcaattttagtggatctacttcgc
ctcatttggttactaattggtttcttgttttataaatcgaaatctcattttcaggaaatt
acaaaacccgtgcagtcagtccattgaggtaatccttgggtcagggggtatttaaatgga
aatggctcaactaagcacggagggtaaagccacagtgaaacttgcctgagtttcacagga
aatgtgagctagccctttagatccataatagatacatcccttctaatgctacttatgtaa
atatgataaagcagactttaagggaagaggggggcctgggagaagcaaaatttatcagct
aaggttaatgtggcatttcttggaaatcttccaaaatagattctgttttcctttgtcttc
ggccactttagctgaggaaaatccttttgtctaaaacccgatttagttatcgcctccctc
acagagctccttttctcttttgcaaaaccccgttccctcggcctcgccgaattgcaagag
aatctttagatcttgttcccactgtaatcccgccgcaaagggagctggtttcctcctcat
tttaaacagacaatcaaaggatttgcgaattttctgcggtaggtcaagtgcagaaacgaa
atctcagcttaccccctcgccaactgaaattgggtgtgctagagcgcgtcaccgaaggca
ggaggcgaggggctccagGGAGAAGGTCTCTACCCCACTT

Primer

(+)CTTCCTCCTCTTCCTGTCAGAGT

(+)AAGTGGGGTAGAGACCTTCTCC