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Human element [ hs231 ]


Position: chr8:25,775,160-25,776,669 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: EBF2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ttCCCTTGCCAGTACCATGACTctcgggtgaaggagagaaatgaagttattagtcagcca
tcagcttaatgggtcctcaccgtcccatttcctcagcaccccttccccatccttcccctc
cccctcccattctctgccctcccggcagagctcatctatgctaggctgagcagtgaacac
caattacacccagagccctttgctgctgcctggtccgctggttttactgttttgccagat
ggttgaggccaatgtgtaaaactctctaccctaccattaattcataactcggtaataact
ttcccacgactccaggaaattgaaatggagtgcaaatgtggagatttggaaagggaatca
aggttggacaactatttcacacctgccagaacagataccagtgagacaaaaagaaaccct
tatttacccaggctggagcattactttccctgaactaaggcagaatgacgcatcatgcaa
tgttggagaaagtggcggacaaagttcagagtgtgggcttctcctggcatcattttctct
ctgcagttttcagctttctacctatcgcaactatgggttcactctccaatgaccttgaga
ttgtgcatctatgtaatgttatattcttatgacagattcatagattagcagatatgagtg
cattctcttgctaagacaggacaccatccaatgtttgttagcatcattaaactaaaactg
acttttcacctgctcccataccatatgcagctgcaaatttctaaattaaactatgaagcc
atgcataaatttacatatattacagactagcctctccatttaacatgcaaatgtactcca
atgtttcagaacaccttctgtcgctaattaatttgctgaattataattagactaatcctg
cataattaataagcacagatttttttttaatttgtaagcagcttgaggagatcattcact
tccttctataaactgctaagtaagtgttaaaaaaaatctggaaagaacatgtgtgaaaag
gtatgtttgatgtcgcatacaaactcaaactagcgtggaagatacagaagtcagtattga
taaaggtacatatttgaagccaacattcaaacaatcaaaaaaaaatcatatccagaggat
ggggtctaattctccctttgtctccttgtatataacgttttattctttgccttctatccg
tcggatcttccaagatcacagaggcgggaaaggattaaagtaaccgtatgttgtattagg
agagataatgatattaacactccactgtatatcaaaacactctgtgcatgctgggtgctt
ataagctcctttgatggtatttggaatcattttcattttggctgccaaaaacacccgaga
tccatctagtggaaacaattaagttccattaggactgtatccattcggtaattattacaa
tgaagggtccctctttcatgctggagagtggagtctcaaagaaaagtatGCATCTGTGCA
CTGAAAAATG
Primer
(+)CACCCTTGCCAGTACCATGACT
(+)CATTTTTCAGTGCACAGATGC


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