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Human element [ hs2300 ]


Position: chr6:85,786,519-85,788,823 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TBX18 - NT5E

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gtCCTGTGGCCATGCAGAATAGAcaccaagcggttaaatagcaaacactgtggtttcata
gaaagatatttgaaggtacagcccaagagatatacttcaatcaacaacttcaacaaagta
ggagagaaacttccagatggtagaaattttagcaaaattattattttatctatttttaaa
gctgtggctgtgtataaaaatcctgccattcctaggcatgtacacagcacaaggacaggg
cccagagacagtggaggatctggcaagggtttgagagcagcgtggtgaaagaaagcggtc
ttcttttatatgcaagccttgtaagaatctgccttctgtgagcaaattagaagcagaagt
tcttttcattgtagaaatacagctagtgatgacactttaaaagtacaaattctgagcaac
agcagcagtgacagtgagaattgccacaattagggtattcatctcattatgatgatgtgg
ctgttcagatggtatgcagagcatcatgggacactgaagatcagaaacgctgcagaacaa
gatgatgaaagaagagggtggtttgaacaaaacccaggcatggaccattcccttaatcac
acctggctaagggttctgatggcttagggactaggaattggaaacaataccagacacagt
tctgctgcatatcagtattggtttgttaagtatattttctcataagtttatgtttgactg
tttcataagctactgagctcattcagcagcaagagttcagttgatttcaaacccctttgt
tatattcataaatttcctggtaaagaaatttcttcagcaatctctatagaagtacttaga
tagggtggaatatttagaatgagggctgtaattagaattatagacccccaactgagggct
ataattagaattctggatgacaataatgaaaaagcagcagcctcctttatagaacagtgc
cagactcaaacttctttctacctgggcagagttacatattgttaccttaacaattttttt
caataggctctgtccccaggtaacaaattaccttcccttcgctgttctttctgctcctcc
actaatcaccactataatctgacaaacttaaaattttgaaagtgatttaacttttaaact
cagctctagagttttttttctagaaacagaaacttccagatgtagatcatttatttaaat
gacatattcctttaaattgatagggagccaactcacaatccccaataatggaaactaggt
acagcagacataacctaattccaatgatgatgaaagaagctcatttgcattctctttatc
aaactttcaccagagttacagtatctgagagaactggtttaagcttcatcctcttttatt
tatcttaccgtttctctagtgagaggacgaatgagtcaccggagtcaggcaatagggaaa
ggagatccagggagaagaaaaccacataatcccttaactggataatcacctctgagtcaa
taaagttgaacatgctttctccttggttttaaggctaatttagaaactgcatgtttttac
tctgaatgtgaatacccagggtgaccagatttcctacaccaccaccactcctgtcagcaa
tatgtctatcagtgcagccttcacttcacctttgcaccttcttcttttctttttctcttt
ttcctgttcaccaccagctatccttccttcttccagggcctccttttcctgaattcttta
ctacagcagtaaacatgtaagttccacaggggctccaaagattagttgagggcccacagg
aataaaaagtgtcttcaagcttcattcactctgcccactaccccctgatgccacagaaga
gagctaacttccgttgtgcactagctatatgtcagacattgctggatgccctgcttccgt
cctctactctctcttgccttcagcaaagtgcagtatccgtttatgttacctattttacag
agtcctcaaatggattatgttttattctgttactgagtagcagaggcaagatagagacac
aagcttttactctttctaccacaaaatgctaccaggcacaatatacagtatctcttattg
tgttcttactttcagtctataatttggtacttatattatgtttctcatattagttcccat
ttagagaggaaattattaaattgtagaacattaaatttttaattacaaaactaaagagaa
ggaaattctagtctgaggattttaatgggtactgaaatcaatctggtttcacttaaaata
cttCAAGGGAATTTCAGAGAAATCG
Primer
(+)cacCTGTGGCCATGCAGAATAGA
(+)CGATTTCTCTGAAATTCCCTTG


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