Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm2284 ]


Position: chr15:35,631,124-35,633,689 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Mir875 - Cox6c

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCTTGCTGTAGTGGCCATTAaacacagagctgtactgcaattgacatggaagctactttc
ccctcattgtcatcagagcaaaaatagagtttcttgccaattcccaagagtttactttct
acacagttcctcttgtaagatatttgaacatatatttatagcacttgtattattcaatct
ggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttgggttgggtt
tggggtttttttctgtgaaacaaggtctcatcgtctctcctggcctcaaattgataatgt
tcttaccccaccccccacctcctagatgtcaggaaggcattaatgtgccacacactggct
aggactgattttaaaatgtgattataaaaatgttcatatgacctaataagaagcttcaac
ccagcttatttttttctattccaaagtgccacgggaaagcatctaattaaaatagggaga
aacaactgtacttcattgtttaatgttgtctctttacctagtgtggttttagtcacttct
gaggcactgaggctcagcagactgcaggttgaactagtaaatatgtgatattaagaagtt
gctccagtcctctcacttagacttcagctctaagcacatctctatggtgttagctgtctg
tgtaatgcattgctgcgaacagatagggaaatgcactgaagtcatctaagaagtaaacta
tccgaggacatgcttttgtagctattgaaaatcttatattgaaacccactgatggtgaaa
ctgtagatctcctgtgatttaagtaccatctggttgtgctcatgactttaaagctgttat
ctccacataaaatttcagagtcctatatttttttccaccaaactatccatttttaagcca
caaatgttttcccatctcttccagattttatctaaaagtatattttaacaatattttaaa
agttcttaaacaataacaatttatcttgatggatggcatgctgtggttttttttttcatt
ttattttaattagccattgaggaaccaaattcccttttgtctttagtatttggaatattg
tttaattattgttatcatgccagatatcttaaaggttattttaccaatacagtttcattt
aacataacccatatggaatcaatagtctagtttcctaaagtgaatgcttggaaactctta
cattcatatgttaagagtacacatcctttcctcattagttggaaagtacagggattttgg
cacaggttctgtgtggaagcattgtgcagcttttatatggattttgtttttagcctttga
tgacactgtttagaataggaagtatctaataagtaaagcattttgtctcaagtgctgcca
gtgtgtttagtatatgcctggaggtctgaaacattatcttcttcactacagtaatatgca
tttaattctctgaaagcagaaggtcgaacttttaaaagggacgcaaagtacattttcaaa
cagaataattcaaaacatatggaataggggaccagagttatgtacagttggtttttatgg
tttaatcatgatcatgttaatgcacaccagtagctaattaaagaaaacttttattgtcca
ttttaaataagttaggtaaggagtggaggagcccatgtagctttgctgcccagagatgta
tactgcactcccccacaggacacaagaacaacaaaaggttaggctcaaacttactacatt
gtgaactttttgtttcttttcagatgagtggtaaatctggtgatgtccaagtttagggtc
caatacatacaaagaatcataaaatagtcctaacagtgggtcagatcttcctcagcagga
tggataaatccacagtgagatggagacaaactgttggattttcaaacatgtctcaatatc
caccttagtgtggtgctaaaatgatttgcatgcttacaaaaatagaaaatcagactttta
actagagttcccatttaaggattaagattcccattagaggattatgaaacctctaatact
gagaaatttttggctcccgcccctccccgcccccagtgagagccagtcttttatctatgg
atcactgattcaaattccattctggtcagtaatgagcagaattagctaccttgtgagttc
ttttcagtaacccatgtgtcctgagcagatagctgccaccttgcctcaccatttacttat
atctcaagacttgagtgatatgtgttggagcctgatgtgtgattctccatgcagactgga
cattcactttccttaccattcttctctaggggatgggtgttgtgtgctcaagggttagca
cctataaggacacttaatatgcttgttttaggggagataagattttaagcataaatgtat
tatggaacacaaaccaacagatttacttaaactatggaaaaaaataagtttataataccc
ccaaatacagtcaacaaacatggattccttaagaacttaattatactactagttgacaat
gtatttggaggtatatttgaaatttTGACAGAATGACACAGAGCCT
Primer
(+)GCTTGCTGTAGTGGCCATTA
(+)AGGCTCTGTGTCATTCTGTCA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.