Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Mouse element [ mm2280 ]


Position: chr15:34,679,878-34,683,490 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 4930413F20Rik - Kcns2

Timepoints:
e12.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAACAGTTTCACATTTAGGTCATTAagccagtggagtttatttttggtgtgaagtagagg
cattgataagtttttccacataggaaatgaacattcttatccagtggttcacaagtccct
ctgtaatttacaatgtctcctctatcacaaagtaatctttggtttctatgggctctgtta
caggattcctattgtgttttattgatgtatttattgtttctgtcttcatcatacatcacc
tttctggagaatgtgaggtagaacccgtaccttccaggcttgatcccttcatcccattcc
tcagttttgtgtacacacatcactagaaaaagctttccaagagctttttaaacttaatat
taattaagtttatttaaaatttaaataatcattgctcctcagctgttagctgtgtacctg
gcagcatgctaactgcatgtgggctagctatccatttctagcagttcgaataagataatc
cttatttttccaatcagacccctgaggcttagaagttgagtaatttgcctgtgttccact
gccaggaaaagataacacaagggcttgaacccagttctgtccatcttacagtgctggtag
acttccattttattttgtaggcttcaagagctccacacccttctcctggtaaaataggga
tattaatctttccctccagtgttgtcatagggaccatgtgagaggatatgtatgatagca
cttgacacacacctaacccataacaggtgcttcatcagctaacatgaagcagcagcagga
agtactggttaaaatttaaaagaaagaaaactatcaaacatcaaattttaccgaatttac
ttacactgccttttaaattgagaacggatgaaagagattatctttagacagcctcctctt
catcctgcttcccagaagcaaaaggaagacagtaagagaaagagtataaggatgaaaaac
cctttgaaacctttatttcatgccaaaattgggaggctgagagccaacagggccttgaag
ctcagcccttgcccagccaaccggaggaataaatggctatggcaggcagatcttacctct
ccaggcactggagctggcaggggtatcatcctccctgtgcgagttaccttcttatccctt
tagtgactgccatggcaacagggcaactgtaggtcttgctctgaagaggaaggtgaaaca
tcacagcctttccaggcagctctccagctaataggaaccacactgatgacagaggctggt
gggcatgaaaaatgcaacaccagaatgcaggctgccttttgtgctggaagacacacacat
gcacacatgcacacacacagacaaacagacacacacccagatacacacagacagacacac
acatacacagaaagacacacacacaaacacacacagagacacacacacagacagatacac
agagacagacacagacacacacagaaagacacacacacacaaacacacacagagacacac
acagagacagatacacagagacagacacagacacacacagacacaaagacacatagacac
atacacagacagacagacacacacacacacacacacttagacagacacacacacacagac
atgcccacagacagacacacactcacagatacacgcatacatacatacacagacacactc
agacagacacacacatgcatgcacacatgcacacacacatccttgtccatacttactttg
tttcagaagtaatggaccagactgagcaccatggttattgcctttccctgatccctcctt
gcacatctgcactgtgtctttgacagctccaccagggccccagggcactctgcaggggtc
agactaacagaaaaacattgcttagaaggacagcacactcttcgccttgtttgacttgga
aattctttctgagtcctgtaagaagcaaaatgttgagtcctagaggaggtgaaaatgcca
tcaggttaagaaagagaaccccaaaacagcaaagcctgtttgcctcccctggggtctggt
tgagagcatttgaggcagctggtgatggcagcaggattctttcaaaggttgttgacttgt
aaaggacagggctctttctttacactgtatgttttccccaaacctggaccccatagcctt
ttcatatggttgaaggaaagaataacattcaacttctatttaggattacagaggtttgaa
aaagaatggattctttggaggaatccaaaaggaccccactccctgacgtgctaacatggt
agtcgtttcctttttccacaccaaatatatgatcccatggacacacctaggatttggccc
gttccagggagtgacagtaacaattgtgctctttttctttcattgctgagacctgccagg
atgtagcaagataacagtaaaaagttggaagaggaatcccccgtgatgaccatgcagagc
cacttctcatggtgtgatgtgcctcatgtctactggtgctctgtggaagcaggagaccag
catgattctagccttcatcctgacatttgcttggtgactatgttggttactttattgctg
tggcaaaatgtctgatgcaaatcacttaaacaaggagggggcttatttgggatcctcttt
tgaggttacactccatagtgaaagggaagtcatggtggtcagagctgccttagctctggg
acaggaaaatgagacaactggtcacaatgtatcagctccttttcgcttttctttcagtag
ggcacccctgctcaggggatggtgctatccatacataggagggttcttcctccattaaaa
ctttctgcacaccttcacagatatcttcagcagcatctcttaggtgtgccttttaagttc
aatcttgataatcaggatcaacggtgggtaggggacccctttgtagaaggctgaggttgg
actggagggcttaccagtgggactaacactctccaggtgcagctgtgtatgctacatctt
gtgttgctgtaaagaaacatgtgcctgaagcaccaaccattcctgctggtttccatttac
ttcttcattcactgccaatcatcctctttctcttcagccccaggaaagaaggaattatta
tgcacacactgggtaggaaggaccagagtggatgagaagtctctttcaatagactaaaac
ttgaactaatcaagtgaggttatgggatgtaagccaggtagttaaggtgacatttggcaa
tgacaacccttactacactgaggattgttctatcgttgatgcttaaatttctgttagtga
cgaggatgataaatccgattgttaaaagttttttctttcctacaaaagtaatatattaaa
acccaatgttcattggaggcttcagtggggggagatttttctgaccctttctgaagttcc
tttgtaataatggcaggataaggatgggtcactctctgcagctgacagatgtgaaaggag
ttcctgcaggaggaatgaaaaccaggctcaggattccagaaaatatccttcatgtccacc
actttacacaaaggtcagtctgctctgctggcaggaggtgagacccaaTAAAGAAACCAA
AATCAAGGGATTC
Primer
(+)AAACAGTTTCACATTTAGGTCATTA
(+)GAATCCCTTGATTTTGGTTTCTTTA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.