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Human element [ hs228 ]


Position: chr10:102,447,081-102,448,985 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: HIF1AN - PAX2

Timepoints:
e11.5
e14.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
agggTGTCCCATTGAATGTTCAGCtgatgagcccactgggaggaggcttcactcaaattt
ataactaactctggcggctgccctgccggccccggcctcttttcccttcctcctcccaga
gaggagcccatggggctgggtgaggacagggaaggagggcagcgcccacgctggagaccc
cagagatgaaagggagcgggccccaagcagaggaagtgggaggggagaagtgaggaagag
cgcgtgagagtgtgtgagagagaaaaatgacaggccctgaatattgggcgccctcacttt
aaatcaagataaaagactgaagtggaaaatgagagtccagagaagccccggacggctcgg
ggcgctaatggaaacacatggctgccggctgcgggcttgtcagcttcccccggcgctgcc
attcccgtctgataatccggcctgccataaaattagactagcaaatacctcctgacaaag
atgcatgtttctctctattgtgccatcataaaaaaaactccgctggtgactcggggagcc
gcaaacttcaatttaaatttacagtgctgcggaaggaaagtgatatgcactcaaaaattt
taataacctattaagttacgacttcaatttcattttatgaatattttccttggggagcac
ggctatcacagagaaagatagaaatttaaaaaagataaatagtgccattaatctccaaca
tttctcttccattatccttgaaaattaggagttatttttgttcagatcttcatgtaatta
gctccctccacttgattcactagccagaaaatgaccatgttcagaaaattaaaaatttgt
cattaagtggaatttaacataatatcatttatctttatctattccccagctgacagcagg
aagccttggctgccttaccggctggtgtgtcagagtagagagggactgcttggggagaga
cactgggggagacagagatagagaccgagggagggagagaaggccagtgcagagggggcc
aaagccaggcgaggagggcaggcaggaggcctccggaactgagagtcagccagggtgggg
aggcagaggaggctgagggcagaagagaggaggcgcaggctgctggggtcagcaggggtg
ggtgtgggcctgagagcagggcagatgggaggggctgagggtggaagaggaaagccagag
aggcacatcaggagcagatgcccaaagacgaaagtagctggctagtagggctggggtgaa
gaagtgacttggaggacagaaacccagcagaaggaaagaaacctccagaaaagggggctc
aaggtgggatgggagaggtaggggacaccctgtccattgggaggactgaccacaatctgg
cttcaagagaagacagagagacaaaaagagatagtcagagagccagagaggaggtgacaa
ggcattgagagccaggaggcagaaatggagtgaggtggcggcaagtgtgagtcagagaga
gagaaacagacagaaggggctccgggaagtcaccatgtttgagaccccagacaagctctt
gaacttctctggaaggctgcatggctcactctcctcctcccctcctctaaacagccccca
ccctagttcccccaagtcagaaatcatccaataaacgattcagacctattcctgggtgga
gagagctgtggccaagcctgagagactgagaattggataaagggattaaacagcagcaca
ttagtgagagatttagagtgtaataaacccatttcataataatatgtgtgttggggcagc
gatccatcatcacaggagcctgtccatggcggggggagcactgatctgctgggaggagac
ccgcacggatggctgaggttttttcTCAGGGTCTCAGGATATGGG
Primer
(+)CACCTGTCCCATTGAATGTTCAGC
(+)CCCATATCCTGAGACCCTGA


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